DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cnx14D and Calr

DIOPT Version :9

Sequence 1:NP_573131.1 Gene:Cnx14D / 32620 FlyBaseID:FBgn0264077 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001262430.1 Gene:Calr / 41166 FlyBaseID:FBgn0005585 Length:406 Species:Drosophila melanogaster


Alignment Length:600 Identity:177/600 - (29%)
Similarity:251/600 - (41%) Gaps:215/600 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAWKMLFAILLLLSAAKTGYLAPE---SEN----SVEDVQI---EPGAIYGDEKFAYKSPVIDAE 55
            |.|.....:||    |..|:::.|   .||    :.||..|   .||..:|  ||     |:...
  Fly     1 MMWCKTVIVLL----ATVGFISAEVYLKENFDNENWEDTWIYSKHPGKEFG--KF-----VLTPG 54

  Fly    56 KFYFADHFDDVEASRKRWVLSQAKKNDIADEIAKYDGIWNWESPQRIFWANDLGLVLKSKAKHAA 120
            .||     :|.||                                      |.|:.....|:..|
  Fly    55 TFY-----NDAEA--------------------------------------DKGIQTSQDARFYA 76

  Fly   121 IAAPFRQPFDFKSN--KPLVVQYELTLQEGQDCGGSYLKLLSAGKGTEQLNRFNDKTPYTIMFGP 183
            .:    :.||..||  ||||||:.:..::..||||.|:||.........:   :.::||.|||||
  Fly    77 AS----RKFDGFSNEDKPLVVQFSVKHEQNIDCGGGYVKLFDCSLDQTDM---HGESPYEIMFGP 134

  Fly   184 DKCG-NNLKMHFIFRHVNPLNGNITEKHCKKPNARLGVPFTDKLPHLYQLVVRPDNSFEIRLDHK 247
            |.|| ...|:|.||.:....:....:..||          .|...|.|.|:|||||::|:.:|::
  Fly   135 DICGPGTKKVHVIFSYKGKNHLISKDIRCK----------DDVYTHFYTLIVRPDNTYEVLIDNE 189

  Fly   248 IIKEGSLLTDFVPPVNPPAEIDDPNDHKPESWDERKKIPDPNAHKPEDWDEDAPPHLPDTDAVMP 312
            .::.|:|..|:  ....|.:|.||...|||.||:|..||||:..||||||:  |.|:|       
  Fly   190 KVESGNLEDDW--DFLAPKKIKDPTATKPEDWDDRATIPDPDDKKPEDWDK--PEHIP------- 243

  Fly   313 NGWLEDEPDMIFDPTAIEPEDWNSEIDGEWEAPLVENPVCKKAPGCGKWKAPLIPNPNYKGKWSA 377
                        ||.|.:||||:.|:|||||.|:::||..|     |:|:...:.||||||.|..
  Fly   244 ------------DPDATKPEDWDDEMDGEWEPPMIDNPEFK-----GEWQPKQLDNPNYKGAWEH 291

  Fly   378 PMIENPNNQGKWAPRKIANPDFFEDLKPFQMTPINAVGLELWSMSSDILFDNLIITDDVELARDF 442
            |              :||||::..|.|.:....|..:|.:||.:.|..:|||::|||||||    
  Fly   292 P--------------EIANPEYVPDDKLYLRKEICTLGFDLWQVKSGTIFDNVLITDDVEL---- 338

  Fly   443 AANSFDIKRLYIDRESFGNKVVELARANRAIWGIVIVAIAVPVAITIFCKFGLGPSRVAAAKKAA 507
                                                                       |||  |
  Fly   339 -----------------------------------------------------------AAK--A 342

  Fly   508 AAAAKKTDDPQPDDDLGAEEEEKLEKGKKEEEKKEEEEEEEKEENKEEKKEEEKDDEKEMKDCEE 572
            ||..|.|.          ..|:|:::.:.|.::|::||        |.||..:||||      :|
  Fly   343 AAEVKNTQ----------AGEKKMKEAQDEVQRKKDEE--------EAKKASDKDDE------DE 383

  Fly   573 EEDDEEKDDEEKTDE 587
            ::||||||||.|.|:
  Fly   384 DDDDEEKDDESKQDK 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cnx14DNP_573131.1 Calreticulin 59..432 CDD:278680 118/375 (31%)
CalrNP_001262430.1 Calreticulin 25..332 CDD:278680 131/415 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46798
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11073
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R163
SonicParanoid 00.000 Not matched by this tool.
44.040

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