DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32202 and hmgb2a

DIOPT Version :10

Sequence 1:NP_730354.2 Gene:CG32202 / 326199 FlyBaseID:FBgn0052202 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_001032501.2 Gene:hmgb2a / 641484 ZFINID:ZDB-GENE-051120-126 Length:213 Species:Danio rerio


Alignment Length:62 Identity:18/62 - (29%)
Similarity:26/62 - (41%) Gaps:13/62 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 KHGDDWRSVPMEAPHPKGKTEQKRRGPKPKNKQAADETG--APGSEP------GPNTPAARK 111
            |.|:.|..:     .||.|:..:::..|.|.|...|...  |.|.:|      ||..||.:|
Zfish   128 KLGEMWSKL-----SPKEKSPYEQKAMKLKEKYEKDVAAYRAKGGKPDGAKKGGPGRPAGKK 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32202NP_730354.2 None
hmgb2aNP_001032501.2 HMG-box_HMGB_rpt1 7..75 CDD:438794
HMG-box_HMGB_rpt2 93..163 CDD:438795 10/39 (26%)
Blue background indicates that the domain is not in the aligned region.

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