DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32202 and HmgZ

DIOPT Version :9

Sequence 1:NP_730354.2 Gene:CG32202 / 326199 FlyBaseID:FBgn0052202 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_001286694.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster


Alignment Length:91 Identity:24/91 - (26%)
Similarity:43/91 - (47%) Gaps:19/91 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VNGIKKIVRRRNHD---VELLKRRLDKHGDDWRSVPMEAPHPKGKTEQKRRGPKPKNK--QAADE 94
            :|..::.:::.|..   .::.||    .|:.||.:       |.|||.:::..|.|.:  :|..|
  Fly    17 LNETREQIKKDNPGSKVTDIAKR----GGELWRGL-------KDKTEWEQKAIKMKEEYNKAVKE 70

  Fly    95 TGAPGSEPGPNTPAARKPRKQKAKQA 120
            ..|.|   |.::.|.:|.:|..||.|
  Fly    71 YEANG---GTDSGAPKKRKKAAAKPA 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32202NP_730354.2 None
HmgZNP_001286694.1 HMG_box 6..71 CDD:395407 14/64 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5648
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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