DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32202 and HmgZ

DIOPT Version :10

Sequence 1:NP_730354.2 Gene:CG32202 / 326199 FlyBaseID:FBgn0052202 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster


Alignment Length:91 Identity:24/91 - (26%)
Similarity:43/91 - (47%) Gaps:19/91 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VNGIKKIVRRRNHD---VELLKRRLDKHGDDWRSVPMEAPHPKGKTEQKRRGPKPKNK--QAADE 94
            :|..::.:::.|..   .::.||    .|:.||.:       |.|||.:::..|.|.:  :|..|
  Fly    17 LNETREQIKKDNPGSKVTDIAKR----GGELWRGL-------KDKTEWEQKAIKMKEEYNKAVKE 70

  Fly    95 TGAPGSEPGPNTPAARKPRKQKAKQA 120
            ..|.|   |.::.|.:|.:|..||.|
  Fly    71 YEANG---GTDSGAPKKRKKAAAKPA 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32202NP_730354.2 None
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 15/65 (23%)

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