DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32202 and Hmg-2

DIOPT Version :10

Sequence 1:NP_730354.2 Gene:CG32202 / 326199 FlyBaseID:FBgn0052202 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_611553.1 Gene:Hmg-2 / 37407 FlyBaseID:FBgn0026582 Length:376 Species:Drosophila melanogaster


Alignment Length:171 Identity:34/171 - (19%)
Similarity:52/171 - (30%) Gaps:74/171 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 MRVNGIKKIVRRRNHDV--ELLKRRLDKH----GDDWRSVPME--APH----------------- 72
            |.:||..:.:..|..::  |..:|...:|    |::|..:|.|  .|:                 
  Fly    78 MPLNGYVRFMNDRREELRREQPQRTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQEQLQM 142

  Fly    73 ------------------------------PKGKT---EQKRRGPKPKNKQAADETGAP------ 98
                                          |||::   :.|:...||..:|:.|....|      
  Fly   143 FLKEHPEIVANELAKAKKATKLDGSPKEKTPKGESALGKAKKTKAKPVKRQSEDPDDVPLAKVKR 207

  Fly    99 GSEPGPNTPAARKPRKQKAKQAPINPNPVIAPPHQQPQPPL 139
            ...|.|.||.|          ||:.|.|...||......||
  Fly   208 AQTPPPPTPPA----------APVQPPPSSVPPATPAPRPL 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32202NP_730354.2 None
Hmg-2NP_611553.1 HMG-box_HMG20 75..154 CDD:438796 12/75 (16%)

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