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Protein Alignment CG32202 and Hmg20a
DIOPT Version :9
Sequence 1: | NP_730354.2 |
Gene: | CG32202 / 326199 |
FlyBaseID: | FBgn0052202 |
Length: | 141 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006243179.1 |
Gene: | Hmg20a / 315689 |
RGDID: | 1564760 |
Length: | 350 |
Species: | Rattus norvegicus |
Alignment Length: | 77 |
Identity: | 20/77 - (25%) |
Similarity: | 30/77 - (38%) |
Gaps: | 18/77 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 73 PKGKTEQKRRG--PKPKNKQAADETGAPGSEPGPNTPAAR---KPRKQKAKQAPINPNPVIA--- 129
|:.:...||.| ...|.|:...::.||.| |.|...| :.|:|...:.|..|.|.|.
Rat 79 PEDEQRSKRGGWSKGRKRKKPLRDSNAPKS---PLTGYVRFMNERREQLRAKRPEVPFPEITRML 140
Fly 130 -------PPHQQ 134
||.::
Rat 141 GNEWSKLPPEEK 152
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG32202 | NP_730354.2 |
None |
Hmg20a | XP_006243179.1 |
HMGB-UBF_HMG-box |
106..171 |
CDD:238686 |
13/50 (26%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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