DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32202 and hmg-5

DIOPT Version :9

Sequence 1:NP_730354.2 Gene:CG32202 / 326199 FlyBaseID:FBgn0052202 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_501245.1 Gene:hmg-5 / 177543 WormBaseID:WBGene00001975 Length:204 Species:Caenorhabditis elegans


Alignment Length:92 Identity:21/92 - (22%)
Similarity:34/92 - (36%) Gaps:28/92 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VRRRNHDVELLKRRLDKHGDDWRSVPMEAPHPKGKTEQKRRGPKPKNKQAADETGAPGSEPGPNT 106
            :..::...||.|....:..||:..:..|        |||:.....|.|:|              .
 Worm    70 ISEKDKYTELSKNYNAQKLDDFMKLSTE--------EQKKLVDSAKEKKA--------------E 112

  Fly   107 PAAR---KPRKQKAKQAPINPNPVIAP 130
            .|:|   |.|::|.||   :..|.:.|
 Worm   113 RASRRHAKERREKRKQ---SGRPSVPP 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32202NP_730354.2 None
hmg-5NP_501245.1 NHP6B <37..187 CDD:227935 21/92 (23%)
HMGB-UBF_HMG-box 132..192 CDD:238686 2/5 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5648
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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