DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Krn and hbegfa

DIOPT Version :9

Sequence 1:NP_524129.1 Gene:Krn / 326198 FlyBaseID:FBgn0052179 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001104696.1 Gene:hbegfa / 797938 ZFINID:ZDB-GENE-080204-119 Length:230 Species:Danio rerio


Alignment Length:91 Identity:24/91 - (26%)
Similarity:34/91 - (37%) Gaps:29/91 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 YCLNDGTCFTVKIHNEILY-------NCECALGFMGPRCE-----YKEIDGSYLPTRNRVMLEKA 122
            :|:: |||         .|       :|.|..|:.|.||.     .|..||.|..|       .|
Zfish   137 FCIH-GTC---------QYFRDLKGPSCICDQGYSGERCHDFSLPVKTNDGGYDRT-------TA 184

  Fly   123 SIVSGATLALLFMAMCCVVLYLRHEK 148
            ..|....|:.|.:.:..::|.||..|
Zfish   185 LAVVAVVLSSLCLTIIGLLLALRFHK 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KrnNP_524129.1 None
hbegfaNP_001104696.1 PHA02887 <130..170 CDD:165214 11/42 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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