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Protein Alignment Krn and tmeff2b
DIOPT Version :9
Sequence 1: | NP_524129.1 |
Gene: | Krn / 326198 |
FlyBaseID: | FBgn0052179 |
Length: | 217 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_005165802.1 |
Gene: | tmeff2b / 797681 |
ZFINID: | ZDB-GENE-101001-4 |
Length: | 358 |
Species: | Danio rerio |
Alignment Length: | 104 |
Identity: | 27/104 - (25%) |
Similarity: | 47/104 - (45%) |
Gaps: | 25/104 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 62 CPPTYVAWYCLNDGTCFTVKIHNEILY-------NCECALGFMGPRCEYKEIDGSY-LPTRNR-- 116
||..|.. || :|.|..| .|.|..||:||:|:.|:.:..| :|...:
Zfish 249 CPERYKD-YC----------VHGECEYPSNLSPPTCSCHSGFIGPQCDRKDYNVMYVVPGSGKLR 302
Fly 117 -VMLEKASIVSGATLALLFMAMCCVVLYL-RHEKLQKQK 153
|:: |||:....:|::.:.:.|:.... |..::.:||
Zfish 303 YVLI--ASIIGALQVAIICLVVLCITRRCPRGNRIARQK 339
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Krn | NP_524129.1 |
None |
tmeff2b | XP_005165802.1 |
KAZAL |
91..136 |
CDD:197624 |
|
KAZAL |
185..231 |
CDD:197624 |
|
PHA02887 |
<245..285 |
CDD:333467 |
14/46 (30%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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