DRSC/TRiP Functional Genomics Resources

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Protein Alignment Krn and zanl

DIOPT Version :9

Sequence 1:NP_524129.1 Gene:Krn / 326198 FlyBaseID:FBgn0052179 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001352287.1 Gene:zanl / 100147904 ZFINID:ZDB-GENE-060131-2 Length:4516 Species:Danio rerio


Alignment Length:93 Identity:31/93 - (33%)
Similarity:43/93 - (46%) Gaps:20/93 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 CLNDGTCFTVKIHNEILYNCECALGFMGPRCEYKEIDGSYLPTRNRVMLEKASIVSGATLA---- 131
            |.|||||...:..:.  |.|.||.||.|..||..||     |.:..  |:|.||:....|.    
Zfish  4404 CQNDGTCNDKEDGSG--YTCICAEGFEGTNCELFEI-----PPKGG--LDKTSIILIGVLVPLGV 4459

  Fly   132 -LLFMAMCCVVLYLRHEKL-QKQKLHDS 157
             |:..|..|:     ::|. :|:|.:||
Zfish  4460 LLILTATVCI-----YKKCSRKKKTYDS 4482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KrnNP_524129.1 None
zanlNP_001352287.1 MAM 38..197 CDD:99706
MAM 204..362 CDD:99706
TIL 588..639 CDD:307783
VWD 703..855 CDD:306577
C8 892..967 CDD:214843
TIL 970..1022 CDD:307783
VWC 1024..1076 CDD:327433
VWD 1083..1235 CDD:306577
C8 1281..1349 CDD:214843
TIL 1352..1405 CDD:307783
VWC 1407..1460 CDD:327433
TIL 1466..1517 CDD:307783
VWD 1581..1733 CDD:306577
C8 1770..1845 CDD:214843
TIL 1848..1900 CDD:307783
VWC 1902..1954 CDD:327433
VWD 1961..2112 CDD:306577
C8 2159..2227 CDD:214843
TIL 2230..2283 CDD:307783
VWC 2285..2338 CDD:327433
TIL 2344..2395 CDD:307783
VWD 2459..2611 CDD:306577
C8 2648..2723 CDD:214843
TIL 2726..2778 CDD:307783
VWC 2780..2832 CDD:327433
VWD 2839..2991 CDD:306577
C8 3037..3105 CDD:214843
TIL 3108..3161 CDD:307783
VWC 3163..3216 CDD:327433
VWD 3224..3378 CDD:306577
C8 3422..3488 CDD:312319
TIL 3492..3545 CDD:307783
TILa 3547..3602 CDD:315397
VWD 3609..3762 CDD:306577
C8 3805..3874 CDD:214843
TIL 3877..3932 CDD:307783
VWC 3934..3988 CDD:327433
VWD 3996..4150 CDD:306577
C8 4214..4282 CDD:312319
TIL 4286..4340 CDD:307783
EGF_CA 4399..4433 CDD:238011 13/30 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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