DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ndfip and Ndfip2

DIOPT Version :10

Sequence 1:NP_730291.1 Gene:Ndfip / 326197 FlyBaseID:FBgn0052177 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_083837.2 Gene:Ndfip2 / 76273 MGIID:1923523 Length:338 Species:Mus musculus


Alignment Length:227 Identity:72/227 - (31%)
Similarity:108/227 - (47%) Gaps:36/227 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 VQLPSQADLMNAQLPPEIHGKLPTYEEVQMEKSLNGELPPAFLTL----PS-------SQQLP-P 114
            |:.||.:.|           ..||.|......:|:.:.||.:.::    |:       |:..| |
Mouse   123 VEQPSTSSL-----------AAPTVEAAASAPALDPDSPPPYSSITVEAPTTSDTDVYSEFYPVP 176

  Fly   115 PPNPLLPPNPLRDGAAAVRSAQPALTFIAIDASD--------PENSLSTTDNL-LGTDIMFITAF 170
            ||..:....|..|.|...::|  ||...|.||..        |.:..|..:.| :|.|.:|:.||
Mouse   177 PPYSVATSLPTYDEAEKAKAA--ALAAAAADAPQRNQEEDCTPRDDFSDVEQLRVGNDGIFMLAF 239

  Fly   171 IVAFLFNWIGFLMLTCFCHTIAARYGALSGFGLSLAKWTLIVKHSTDLASHENS--WLWWLICAF 233
            .:||:|||:||.:..|..:|||.||||:.||||||.||.|||:.|.....:.|.  ||||:....
Mouse   240 FMAFIFNWLGFCLSFCITNTIAGRYGAICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVL 304

  Fly   234 GFLISIRALIQYVSIKRSWRLLSASAQERLLF 265
            |.|:..|..:.|:.::.....::|:.:.|..|
Mouse   305 GLLLFFRGFVNYLKVRNMSESMAAAHRTRYFF 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NdfipNP_730291.1 NDFIP-like 23..253 CDD:412068 69/213 (32%)
Ndfip2NP_083837.2 NDFIP2 105..338 CDD:412070 72/227 (32%)

Return to query results.
Submit another query.