DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sunn and Vmp1

DIOPT Version :10

Sequence 1:NP_729739.3 Gene:sunn / 326196 FlyBaseID:FBgn0052088 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_083754.2 Gene:Vmp1 / 75909 MGIID:1923159 Length:406 Species:Mus musculus


Alignment Length:470 Identity:95/470 - (20%)
Similarity:156/470 - (33%) Gaps:132/470 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 ITLSQRQHQEQEIEQHILETYVKIPQNPRKNITYEQFRNELTRYLKTLIQYFP-----PLQEFDF 411
            |.:|:.||.....:...:....:..:..|:||.       |.|.....:|||.     .|:|:. 
Mouse    13 IAMSKDQHNGSLTDPSSVHEKKRRDREERQNIV-------LWRQPLITLQYFSLETLVVLKEWT- 69

  Fly   412 YARVLTARNVRIE-LSLIAAQCASIIFEMHMAEYTSLPVARDQVNELL-RVWSRILKASSKQNGT 474
             :::...:::.:. |.|:||..|:...|....:|    |.|.:...|| ..|..:...||...||
Mouse    70 -SKLWHRQSIVVSFLLLLAALVATYYVEGAHQQY----VQRIEKQFLLYAYWIGLGILSSVGLGT 129

  Fly   475 RPLIYSIYDLIDFDSVA----ECDADLLLNLESSCLENFLN---DDTIIESEFQRLYVNISRSVG 532
            ....:.:|......||.    ||::           .||..   .|.||..|.:          |
Mouse   130 GLHTFLLYLGPHIASVTLAAYECNS-----------VNFPEPPYPDQIICPEEE----------G 173

  Fly   533 ATGNIQIHTTTSRALRDEQA----------------ALQLRLNNTDPESPEMQQLLKEYAFSYMR 581
            |.|.|.:.:..|: :|.|..                |...||:..:|:..|.|:      |..|.
Mouse   174 AEGAISLWSIISK-VRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQE------FEEML 231

  Fly   582 IHAVLMVNKLHVRYVADIYETLAKFVLEMPTLNENITLYG---SESLANMLVLLHGDLKDSDGEM 643
            .||          ..|..:.:.||  |.:..|.:.:..:|   ..|:.|.|..|.|         
Mouse   232 EHA----------EAAQDFASRAK--LAVQKLVQKVGFFGILACASIPNPLFDLAG--------- 275

  Fly   644 IDKVSGLVKQLQDFCVSELRKEKLNLKRAKFFVCSTLIMHINQLPYLSLDSAAYDKILEVLTSPP 708
            |.....||.....|..:.:.|..:.:...|.||..|...||            .::::..:.:.|
Mouse   276 ITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIVTFSKHI------------VEQMVTFIGAVP 328

  Fly   709 RESPP-ELPSNTYV----ADMHYMFRLLIKTEEFDLPTNRVWKLLMKYKMSSIKCLDTEIEDLIN 768
            ...|. :.|...|:    ..:|:       ..|...|....|             |....|.|:.
Mouse   329 GIGPSLQKPFQEYLEAQRQKLHH-------RSEAGTPQGENW-------------LSWMFEKLVV 373

  Fly   769 VFIKYRIESYIHYMS 783
            ..:.|.:.|.|:.|:
Mouse   374 AMVCYFVLSIINSMA 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sunnNP_729739.3 None
Vmp1NP_083754.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37 4/23 (17%)
VTT domain. /evidence=ECO:0000250|UniProtKB:Q96GC9 173..316 37/170 (22%)
SNARE_assoc <247..298 CDD:469768 12/59 (20%)

Return to query results.
Submit another query.