DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32081 and Y18D10A.23

DIOPT Version :9

Sequence 1:NP_729646.1 Gene:CG32081 / 326194 FlyBaseID:FBgn0052081 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_493251.1 Gene:Y18D10A.23 / 173155 WormBaseID:WBGene00012487 Length:503 Species:Caenorhabditis elegans


Alignment Length:421 Identity:96/421 - (22%)
Similarity:179/421 - (42%) Gaps:74/421 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGDK-------GGFDPY---ENRNV----------AHPISDIGAFFSLLKCVVGTGVMAIPLSFN 45
            ||.|       ||..|:   ||..|          :|.||.:.|...::..::|.|::::||:..
 Worm     1 MGSKKVYTVNSGGKLPHKVSENSTVSTDSSSTYHNSHGISWLMAAVFIVGDMMGAGMISLPLALG 65

  Fly    46 YAGIVTG--IILLVSVCFMLIHGMQMLIICMIECSRRMQIGYATYPVAMVYSFDQGPRFFKYISK 108
            .:|::.|  :|||.|: |....|:|     :.|....|||.:..|.......:.:  ..::.:..
 Worm    66 RSGLIAGCVLILLASI-FSGYTGIQ-----LGENWEMMQIRWPKYRTHCRRPYPE--MAYRALGN 122

  Fly   109 AGRYIVDGVLAFSQFGVCVVYNVFVAATLKQLVD-FYWVVADLRIYIAVIALCLIP------PFQ 166
            ..|.:|...|..|||.:..|..:..|.....|:: |:.:..|..::|..|||.|.|      |..
 Worm   123 WARQVVAVCLVVSQFLIACVLLLISAENFTNLLNTFFHLHLDFCVFIVAIALVLWPFSLLQSPMD 187

  Fly   167 IRKLKYL--VPFNILASILIY-TGFSLMMYYLFVDLPPITERNILFGRIDKIPLFFGIALFSITS 228
            ..:|..:  |...|.|.:::: ..:.:.....:..:|.:..:        :..|.:|..:|:...
 Worm   188 FWQLAVISAVSSTIAAGLIVFGASWDMTSCVPYRQMPSLEAK--------QFTLAYGTIVFAFGG 244

  Fly   229 VGVMLAVEATMAKPRHYLGWFGILDRAILLVIISYVTFGLMGYWRYGDETAGSISLNIPTDEV-- 291
            .|....::..||.|..:..  .::...||:.:: |:...:.|...|||....::   ||:.::  
 Worm   245 HGAFPTIQHDMAMPHQFNK--SVISSYILITLV-YLAVSITGLIAYGDSMIDTV---IPSIQLTW 303

  Fly   292 LSQVAKGFIAAAIFLTYPLAGFVIIDIIMNHF------WNKNGDLPNA-ALKESILRACTVVLIC 349
            ::|.....|.|.|..|        |.|:::..      |.|   :||. ..:..::|...:.|:.
 Worm   304 VAQTINILITAHILPT--------IIIVLSPLSQQVEEWIK---IPNQFGCRRVLVRTFILFLVM 357

  Fly   350 ITAIIAPNLGPLLSLVGALTISLLNLVFPAL 380
            .||:....||..|.||||.||:|:.::.|::
 Worm   358 FTALSVLKLGLFLDLVGATTITLMTMLLPSI 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32081NP_729646.1 SLC5-6-like_sbd 17..422 CDD:294310 87/385 (23%)
SdaC 20..415 CDD:223884 85/382 (22%)
Y18D10A.23NP_493251.1 SLC5-6-like_sbd 37..391 CDD:382020 87/385 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166192
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

Return to query results.
Submit another query.