DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32075 and Las1l

DIOPT Version :9

Sequence 1:NP_001246712.1 Gene:CG32075 / 326192 FlyBaseID:FBgn0052075 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001361646.1 Gene:Las1l / 76130 MGIID:1923380 Length:776 Species:Mus musculus


Alignment Length:602 Identity:128/602 - (21%)
Similarity:222/602 - (36%) Gaps:142/602 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PPNVKQRTVVTPWRDTLEFNTTYKWLFGKSNTPATWRQALSKIRIWCLRRGSLCPAAVLATSVLV 96
            |.:...|.:|..|....|:.....:||  .:.....:.||::|.:|..|.|:..|.||.:|:.||
Mouse    18 PESPSARGIVVSWLSRAEWEQVTVYLF--CDDHKLQQYALNRITVWRSRLGNELPLAVASTADLV 80

  Fly    97 QAHLEDQEGSA---KIQDTYASAFTRFYNFMSS-IIQGHNMSSMYETAKELGLQSFIVDLRHLCA 157
            :..|.|..|:.   :::..|..|..||.|.:|. ..:..|:...| .|:|:.:..:||:|||...
Mouse    81 RCKLIDAAGTLGTDELRLLYGMALVRFVNLISERKTKCSNLPLKY-LAQEVNIPDWIVELRHNLT 144

  Fly   158 HGQELPPVEVLRNTSNHCLEWLRTYYWLPHME----TMSNLDAGKLHRKDKLKFEKAV--TDLLE 216
            | :::|.:...|......|.||:..||...:|    ....||..:|..:|..:.|:.:  .|:||
Mouse   145 H-KKMPHINECRRGCYFVLNWLQKTYWSRQLEGSLKETWELDEDQLDAEDPEEEEREIIADDVLE 208

  Fly   217 IY----------DLTLE--CHIKGAEKLKAISKLKSSGE--FNKIRVYSSS------KKAKTSKE 261
            ..          :|.:|  .:.||.|::.:..:..|..:  :.|.|....|      |..:..:.
Mouse   209 EIPEPQDDDKDEELAVEDDANTKGNEEVASHPEPSSRHKELYEKARELLVSYEEEQFKVLEKHRH 273

  Fly   262 ILSA--VLGDLSALVKKESSSMKDL--------LDIYTK---CLLKMKYFLGVGLEIDDNE---- 309
            :|.|  |..:||..|:.....:|.:        ||.:..   .:...:....:.:|.:|.:    
Mouse   274 LLQAIKVWNNLSPRVQCILEELKSISWENRDAVLDAFLDDGFLIPTFEQLAALQIEYEDGQTEVQ 338

  Fly   310 ----------------DVII---------AATQGLFRLLAVQGYIEKVFLAL------------- 336
                            :|::         ...:||......|..:|::|..|             
Mouse   339 KGEVTEPNSHKNIDLNEVLVPKPFSQFWQPLLRGLHSQTFTQALLERMFSELSTVGSTGIRPTYI 403

  Fly   337 ----VQL--SENQNESEQRRLGASYW-AKKMLETFGMLFRMKRMYKAELDLNDKLK-----PADF 389
                |:|  :..:.....||..||.| |:|....|..        .|.||....::     |...
Mouse   404 LRWTVELIVANTKTGRNARRFSASQWEARKSWRLFNC--------SATLDWPQVIESCLGSPCWA 460

  Fly   390 ATLNTDKISKTMRSLLVHSNAD--LSVTLIFGDNPKKSRSLIFDRDFIMQRVDAFSNYS---AP- 448
            :......:.|.|..:|.....:  |.|..|:..|.:..         :.:.::..|:.|   || 
Mouse   461 SPQLLQVVFKAMGQVLPDEEQEKLLRVCSIYTQNGENG---------LAKAIEGSSSSSTGKAPY 516

  Fly   449 ILKGLLPLADPPYTKTQIEDLTK------LCDAQL-------EEFYEEEAMEEDSSSEESNNLDR 500
            .|..|.....||.|..:.|:..:      |.|.:.       ||..|||.|||:...||....:.
Mouse   517 TLDTLHEDLQPPGTNCESEESIQQKEQGNLKDVKQEEKKENEEEEKEEEEMEEEEEEEEEEKEEE 581

  Fly   501 LERFLEQAAQSKEHTSD 517
                 |:..:.:||..:
Mouse   582 -----EEEQEQEEHQEE 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32075NP_001246712.1 Las1 42..186 CDD:281960 42/147 (29%)
Las1lNP_001361646.1 Las1 28..172 CDD:367775 42/147 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 185..247 13/61 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 501..646 25/98 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 733..759
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848762
Domainoid 1 1.000 57 1.000 Domainoid score I10884
eggNOG 1 0.900 - - E1_KOG2425
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005077
OrthoInspector 1 1.000 - - oto92537
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15002
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R650
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.960

Return to query results.
Submit another query.