Sequence 1: | NP_001259619.1 | Gene: | para / 32619 | FlyBaseID: | FBgn0285944 | Length: | 2145 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_062528.2 | Gene: | Cacna1f / 54652 | MGIID: | 1859639 | Length: | 1984 | Species: | Mus musculus |
Alignment Length: | 2057 | Identity: | 496/2057 - (24%) |
---|---|---|---|
Similarity: | 848/2057 - (41%) | Gaps: | 575/2057 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 69 EDEGPQPDPTLEQGVPIPVRLQGSFPPELAS---------TPLEDIDPYYSNVLTFVVVSKGKDI 124
Fly 125 FRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILM--IMP--------TTPTVE 179
Fly 180 STEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDLG---------- 234
Fly 235 -------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQI 292
Fly 293 YMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDEGISFPLCGNISGAGQ-CDDDYVC 356
Fly 357 LQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAG---PWHMLFFIVIIFLGSF 418
Fly 419 YLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKAAKLEERANAQAQAAADAAAAEE 483
Fly 484 AALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATK 548
Fly 549 VRKVSTTSLSLPGSPFNIRRGSRSSHKYTI------RNGRGRFGIPGSDRKPLVLSTYQDAQQHL 607
Fly 608 PYADDSNAVTPMSEENGAIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKE 672
Fly 673 SKLRNRNTRNQSVGATNGGTTCLDTNHKLDHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVD 737
Fly 738 MKDVMVLNDIIEQAAGRHSRASDRGVSVYYFPTEDDDEDGPTFKDKALEVILKGIDVFCVWDCCW 802
Fly 803 VWLKFQEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATM 867
Fly 868 KLMAMSPKYYFQEGWNIFDFIIVA-----LSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLN 927
Fly 928 LLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDGDLPRWNFTDFMHSFMI 992
Fly 993 VFRVLCGE-WIESMWDCM-------YVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLS 1049
Fly 1050 APTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSGERTNQISWIWSEGKG 1114
Fly 1115 VCRCISAEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKSKYLN 1179
Fly 1180 NATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEELDEEGECEEGPLDG 1244
Fly 1245 DIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFW--QGWGNLRLKTFQLIENKYFETAV 1307
Fly 1308 ITMILMSSLALALEDVHLPQR--PILQDILYYMDRIFTVIFFLEMLIKWLALGFKVY---FTNAW 1367
Fly 1368 C-WLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIF 1431
Fly 1432 NVLLVCLIFWLIFAIMGVQLFAGKYFKCED-----MNGTKLSHEIIPNRNACES--ENYTWVNSA 1489
Fly 1490 MNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNL 1554
Fly 1555 FIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRP----QAIVFEI 1615
Fly 1616 VTDKKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALR-YHYFI 1679
Fly 1680 EPWNLFDVVVVILSILGLVLSDI----------IEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGI 1734
Fly 1735 RTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSG--INDVYNFKTFGQSMILLFQ 1797
Fly 1798 MSTSAGWDGVLDAIINEEACDPPDNDKGYPG---NCGSATVGITFLLSYLVISFLIVINMYIAVI 1859
Fly 1860 LENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHK--PNKY- 1921
Fly 1922 --KIISMDIPICRGDLMYCVDILDALTKDFFARK--GNPIEETGE----------------IGEI 1966
Fly 1967 AARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKARGEGG 2008 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
para | NP_001259619.1 | Ion_trans | 165..436 | CDD:278921 | 78/301 (26%) |
Na_trans_cytopl | 515..648 | CDD:288761 | 11/138 (8%) | ||
Ion_trans | 835..1028 | CDD:278921 | 58/205 (28%) | ||
Na_trans_assoc | 1054..1296 | CDD:284034 | 38/243 (16%) | ||
Ion_trans | 1318..1571 | CDD:278921 | 96/265 (36%) | ||
Na_channel_gate | 1561..1613 | CDD:240441 | 12/55 (22%) | ||
Ion_trans | 1636..1871 | CDD:278921 | 80/250 (32%) | ||
GPHH | 1880..1930 | CDD:293510 | 13/54 (24%) | ||
Cacna1f | NP_062528.2 | Ion_trans | 109..383 | CDD:278921 | 77/300 (26%) |
Ion_trans | 546..763 | CDD:278921 | 66/222 (30%) | ||
Ion_trans | 891..1110 | CDD:278921 | 84/224 (38%) | ||
Ion_trans | 1210..1455 | CDD:278921 | 80/251 (32%) | ||
GPHH | 1463..1526 | CDD:293510 | 14/62 (23%) | ||
Ca_chan_IQ | 1528..1599 | CDD:285917 | 17/78 (22%) | ||
CAC1F_C | 1623..1981 | CDD:293490 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |