Sequence 1: | NP_001259619.1 | Gene: | para / 32619 | FlyBaseID: | FBgn0285944 | Length: | 2145 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038936827.1 | Gene: | Scn5a / 25665 | RGDID: | 3637 | Length: | 2020 | Species: | Rattus norvegicus |
Alignment Length: | 2174 | Identity: | 944/2174 - (43%) |
---|---|---|---|
Similarity: | 1274/2174 - (58%) | Gaps: | 308/2174 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 SLFRPFTRESLVQIEQRIAAEHEKQKELERKRAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPT 78
Fly 79 LEQGVPIPVRLQGSFPPELASTPLEDIDPYYSNVLTFVVVSKGKDIFRFSASKAMWMLDPFNPIR 143
Fly 144 RVAIYILVHPLFSLFIITTILVNCILMIM----PTTPTVESTEVIFTGIYTFESAVKVMARGFIL 204
Fly 205 CPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVK 269
Fly 270 NLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKKF-PLDGSWGNLTDEN--W---DYHNRNSSN 328
Fly 329 WYSEDEGISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDL 393
Fly 394 YQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAA 458
Fly 459 AKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKMSIRS 523
Fly 524 VEVESESVSVIQRQP-APTTAHQATKVRKVSTTSLSLPGSPFNIRR-----GSRSSHKYTIRNGR 582
Fly 583 GRFGI-PGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEEN-GAIIVPVYYGNLGSRHSSYTSH 645
Fly 646 ----QSRISYTSHG------DLLGGMAVMGV----STMTKESKLR----NRNTRNQSVGATNGGT 692
Fly 693 TCLDTNHKLDHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAAGRHSR 757
Fly 758 ASDRGVSVYYFPTEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKFQEWVSLIVFDPFVEL 822
Fly 823 FITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATMKLMAMSPKYYFQEGWNIFDF 887
Fly 888 IIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF 952
Fly 953 IFAVMGMQLFGKNYHDHKDRFPD-GDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMYV-GDVS 1015
Fly 1016 CIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIAD 1080
Fly 1081 ------------------------CFKLIRNKLTNQISDQPSGERTNQISWIWSEGKG------- 1114
Fly 1115 VCRCISAEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKSKYLN 1179
Fly 1180 NATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDL----GLDEELDEEGECEEG 1240
Fly 1241 PLDGDIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFET 1305
Fly 1306 AVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWL 1370
Fly 1371 DFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLL 1435
Fly 1436 VCLIFWLIFAIMGVQLFAGKYFKCEDMNGTK----LSHEIIPNRNACESENYT----WVNSAMNF 1492
Fly 1493 DHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIG 1557
Fly 1558 VIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFD 1622
Fly 1623 IIIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDV 1687
Fly 1688 VVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNIC 1752
Fly 1753 LLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIIN--EE 1815
Fly 1816 ACDPP-DNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDY 1879
Fly 1880 DMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDILDA 1944
Fly 1945 LTKDFFARKGNPIEETGEIGEI---------AARPDTEGYEPVSSTLWRQREEYCARLIQHAWRK 2000
Fly 2001 HKA-----------RGEGGGSFEPDTDHGDGGDPDAGDPAPDEATDGDAPAGGDGSV----NGT- 2049
Fly 2050 AEGAADADESNVNS----PGEDAAAAAAA 2074 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
para | NP_001259619.1 | Ion_trans | 165..436 | CDD:278921 | 159/280 (57%) |
Na_trans_cytopl | 515..648 | CDD:288761 | 33/144 (23%) | ||
Ion_trans | 835..1028 | CDD:278921 | 122/194 (63%) | ||
Na_trans_assoc | 1054..1296 | CDD:284034 | 51/276 (18%) | ||
Ion_trans | 1318..1571 | CDD:278921 | 162/260 (62%) | ||
Na_channel_gate | 1561..1613 | CDD:240441 | 35/51 (69%) | ||
Ion_trans | 1636..1871 | CDD:278921 | 144/237 (61%) | ||
GPHH | 1880..1930 | CDD:293510 | 28/49 (57%) | ||
Scn5a | XP_038936827.1 | Ion_trans | 131..424 | CDD:395416 | 168/297 (57%) |
Na_trans_cytopl | 484..668 | CDD:403218 | 40/211 (19%) | ||
Ion_trans | 717..930 | CDD:395416 | 134/212 (63%) | ||
Na_trans_assoc | 956..1203 | CDD:399489 | 51/276 (18%) | ||
Ion_trans | 1207..1482 | CDD:395416 | 170/276 (62%) | ||
Na_channel_gate | 1474..1526 | CDD:240441 | 35/52 (67%) | ||
Ion_trans | 1531..1785 | CDD:395416 | 153/253 (60%) | ||
GPHH | 1797..1844 | CDD:407139 | 26/46 (57%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 342 | 1.000 | Domainoid score | I1036 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1645 | 1.000 | Inparanoid score | I74 |
OMA | 1 | 1.010 | - | - | QHG52281 | |
OrthoDB | 1 | 1.010 | - | - | D37221at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000268 | |
OrthoInspector | 1 | 1.000 | - | - | otm45846 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100419 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X214 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.780 |