DRSC/TRiP Functional Genomics Resources

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Protein Alignment para and Tpcn1

DIOPT Version :10

Sequence 1:NP_001259619.1 Gene:para / 32619 FlyBaseID:FBgn0285944 Length:2145 Species:Drosophila melanogaster
Sequence 2:NP_665852.1 Gene:Tpcn1 / 252972 MGIID:2182472 Length:817 Species:Mus musculus


Alignment Length:843 Identity:167/843 - (19%)
Similarity:305/843 - (36%) Gaps:260/843 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1252 DEDI-----LDEYPADCCPDS------------------YYKKFPILAGDDDSP-------FW-- 1284
            |:|:     |||..:...|.|                  :..:.|.|....|||       .|  
Mouse     6 DDDVPLILTLDEAESAPLPPSNSLGQEQLPSKNGGSHSIHNSQVPSLVSGADSPPSSPTGHNWEM 70

  Fly  1285 ----------QGWGNLR----------LKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRP 1329
                      :|..|.:          |..:..:.|.:|   .:..:|.:.|.|.|.....|..|
Mouse    71 NYQEAAIYLQEGQNNDKFFTHPKDARALAAYLFVHNHFF---YMMELLTALLLLLLSLCESPAVP 132

  Fly  1330 ILQDILYY-----MDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGA 1389
            :|:...|.     :..:..|:|.|.|.::|  |||..:..:....:...:::|..|..:..||  
Mouse   133 VLKLHTYVHATLELFALMVVVFELCMKLRW--LGFHTFVRHKRTMVKTSVLVVQFIEAIVVLV-- 193

  Fly  1390 GGIQAFKTMRTLRALRPLRAMS--RMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLF 1452
               :....:|..||||.:..:.  ...|:|..:..:.|::|...::||:.|.|.:||||:|..||
Mouse   194 ---RQTSHVRVTRALRCIFLVDCRYCGGVRRNLRQIFQSLPPFMDILLLLLFFMIIFAILGFYLF 255

  Fly  1453 AGKYFKCEDMNGTKLSHEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMND 1517
            :..                       .|:.|        |..:.|:.:.||.:.|...:..:|  
Mouse   256 STN-----------------------PSDPY--------FSTLENSIVNLFVLLTTANFPDVM-- 287

  Fly  1518 AIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNE----------------- 1565
                     .|....|.:..::|:.::....:|.:||.:.|:.|.||:                 
Mouse   288 ---------MPSYSRNPWSCVFFIVYLSIELYFIMNLLLAVVFDTFNDIEKHKFKSLLLHKRTAI 343

  Fly  1566 ---------QKKKAGGSLEMFMTEDQKKYYN----------AMKKMG-SKKPLKAIP-------- 1602
                     |::.||.|...|  |...::|.          ..|.:. |..||.::.        
Mouse   344 QHAYGLLASQRRPAGISYRQF--EGLMRFYKPRMSARERFLTFKALNQSNTPLLSLKDFYDIYEV 406

  Fly  1603 ----------RPRW-----RPQAIVFE----IVTDKKFDIIIMLFIGLNMFTMTLDRYDAS---- 1644
                      |..|     |...::|:    :|..|.|...:.|.:.:|...:.::.:...    
Mouse   407 AALQWKAKRNRQHWFDELPRTAFLIFKGINILVNSKAFQYFMYLVVAVNGVWILVETFMLKGGNF 471

  Fly  1645 DTYNAVLDYLNAIFVVIFSSECLLKIFAL-RYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFV 1708
            .:.:....||  :|:.|:..|..:|:..| ...|....|||||..|...:.|||:...:..:.|.
Mouse   472 TSKHVPWSYL--VFLTIYGVELFMKVAGLGPVEYLSSGWNLFDFSVTAFAFLGLLALTLNMEPFY 534

  Fly  1709 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF--- 1770
            ...:||.:      ::|||.|..|..|.:|..:...||.:.::.|.|....:.|||.||.||   
Mouse   535 FIVVLRPL------QLLRLFKLKKRYRNVLDTMFELLPRMASLGLTLLTFYYSFAIVGMEFFNGR 593

  Fly  1771 ------------------MH-VKEKSGINDVY----NFKTFGQSMILLFQMSTSAGWDGVLDAII 1812
                              .| |..|:.:.:.|    ||.....|.:.||:::....|..:::.:.
Mouse   594 LTPNCCNTSTVADAYRFINHTVGNKTKVEEGYYYLNNFDNILNSFVTLFELTVVNNWYIIMEGVT 658

  Fly  1813 NEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILE------NYSQATED-- 1869
            ::.                |....:.|:..|:|.  ::|:.:.:|.|||      |||:.::|  
Mouse   659 SQT----------------SHWSRLYFMTFYIVT--MVVMTIIVAFILEAFVFRMNYSRKSQDSE 705

  Fly  1870 ------VQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISM 1926
                  :::.::.::.....|:::  :..||.    ..::..||.|.      :..||:..||
Mouse   706 VDSGIVIEKEMSKEELMAVLELYR--EERGTS----SDVTRLLDTLS------QMEKYQQNSM 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
paraNP_001259619.1 Ion_trans 152..436 CDD:459842
Na_trans_cytopl 555..740 CDD:463401
Ion_trans 817..1028 CDD:459842
Na_trans_assoc 1054..1296 CDD:461936 16/95 (17%)
Ion_trans 1300..1571 CDD:459842 61/303 (20%)
Na_channel_gate 1561..1613 CDD:240441 17/111 (15%)
Ion_trans 1621..1871 CDD:459842 64/294 (22%)
GPHH 1882..1929 CDD:465306 10/45 (22%)
Tpcn1NP_665852.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..65 7/44 (16%)
Ion_trans 137..331 CDD:459842 51/242 (21%)
Ion_trans 441..692 CDD:459842 61/276 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 785..817
Blue background indicates that the domain is not in the aligned region.

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