DRSC/TRiP Functional Genomics Resources

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Protein Alignment para and Cacna1i

DIOPT Version :10

Sequence 1:NP_001259619.1 Gene:para / 32619 FlyBaseID:FBgn0285944 Length:2145 Species:Drosophila melanogaster
Sequence 2:XP_006521012.1 Gene:Cacna1i / 239556 MGIID:2178051 Length:2226 Species:Mus musculus


Alignment Length:2411 Identity:533/2411 - (22%)
Similarity:908/2411 - (37%) Gaps:775/2411 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 EDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPYYSNVLTFVVVSKGKDIFRFSASKAM 133
            |..||:..|....|:..|  |.|:.|    ..|..|:.|    |..|.:        |.:.|...
Mouse    22 EQPGPRSPPPSPPGLEEP--LDGTNP----DVPHPDLAP----VAFFCL--------RQTTSPRN 68

  Fly   134 WMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCIL--MIMP------TTPTVESTEVIFTGIYT 190
            |           .|.::.:|.|....:..||:||:.  |..|      .:...:..:|....|:.
Mouse    69 W-----------CIKMVCNPWFECVSMLVILLNCVTLGMYQPCDDMECLSDRCKILQVFDDFIFI 122

  Fly   191 F---ESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDLG--NLAALRTFRVLRALKT 250
            |   |..:|::|.| |.....||.|.||.|||.::....|...:||.  ||:|:||.||||.||.
Mouse   123 FFAMEMVLKMVALG-IFGKKCYLGDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRVLRPLKA 186

  Fly   251 VAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCI--KKFPLDGSWGN 313
            :..||.::.:|..:::::..|.:|::|..|...:|.::|:|::.|:|..:|.  :.|.:.|... 
Mouse   187 INRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCFLEENFTIQGDVA- 250

  Fly   314 LTDENWDYHNRNSSNWYSEDEGISFPLCGNISG----------------AGQC----DDDY---- 354
                        ...:|..:|....|...::||                ..:|    ||.|    
Mouse   251 ------------LPPYYQPEEDDEMPFICSLSGDNGIMGCHEIPPLKEQGRECCLSKDDMYDFGA 303

  Fly   355 -------------------VCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRA 400
                               ||..| ..||:.|..:||:.|:|::..|:::|.:.|.::...|:.|
Mouse   304 GRQDLNASGLCVNWNRYYNVCRTG-NANPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDA 367

  Fly   401 AGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKK---------------------AEEEEA 444
            ...::.::||::|.:|||:::||.|.::|..:.|.:::                     ||..:.
Mouse   368 HSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTVASYAEPGDC 432

  Fly   445 AEE------EAIREAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYEL 503
            .||      ..:|:|:..|......|:.|  .||......|.|:..   |. ||.|:: |     
Mouse   433 YEEIFQYVCHILRKAKRRALGLYQALQNR--RQATGPGTPAPAKPG---PH-AKEPSH-C----- 485

  Fly   504 FVGGEKGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGS-PFNIR 567
                          |:..|             ..|..||.|  |.|:.:|....|.|.| |    
Mouse   486 --------------KLCPR-------------HSPLDTTPH--TLVQPISAILASDPSSCP---- 517

  Fly   568 RGSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYY 632
               |..|:              :.|:|..|.:....|:                           
Mouse   518 ---RCQHE--------------AGRRPSGLGSTDSGQE--------------------------- 538

  Fly   633 GNLGSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRNQSVGATNGGTTCLDT 697
                                                                 |:.:||:.    
Mouse   539 -----------------------------------------------------GSGSGGSA---- 546

  Fly   698 NHKLDHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAAGRHSRASDRG 762
                             ||                                 :|.|...::|:.|
Mouse   547 -----------------EA---------------------------------EANGDGPQSSEDG 561

  Fly   763 VSVYYFPTEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKFQEWVSLIVFDPFVELFITLC 827
            || .....|::.|||      |..:            |..||.:.:..:..||...:....|.:.
Mouse   562 VS-SGLGKEEEQEDG------AARL------------CGDVWRETRAKLRGIVDSKYFNRGIMMA 607

  Fly   828 IVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATMKLMAMSPKYYFQEGWNIFDFIIVAL 892
            |:|||:.|.::||:..:|:..:|:..|..||:.||:|..:||.|.....|.:..:||||.|||.:
Mouse   608 ILVNTVSMGIEHHEQPEELTNILEICNVVFTSMFALEMILKLAAFGLFDYLRNPYNIFDSIIVII 672

  Fly   893 SLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVM 957
            |:.|:..:...||||||:||||||.||.:..|.|...:.::.:||..:.....:|.:.||||:::
Mouse   673 SIWEIVGQADGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSIL 737

  Fly   958 GMQLFGKNYH---DHKDRFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWD-CMYVGDVSCIP 1018
            ||.:||..:.   |..|..||    |.||...:.:.:.||::|..|    .|: .:|.|..|..|
Mouse   738 GMHIFGCKFSLRTDTGDTVPD----RKNFDSLLWAIVTVFQILTQE----DWNVVLYNGMASTTP 794

  Fly  1019 ----FFLATVVIGNLVVLNLFLALLLSNF---GSSSLSAPTADNDTNKIAE-------------- 1062
                :|:|.:..||.|:.||.:|:|:..|   |.::.|....|..::.:.|              
Mouse   795 WASLYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDEDQSSSNLEELDKLPEGLDSSRDL 859

  Fly  1063 ------------------------------------------------------AFNRI------ 1067
                                                                  :..|:      
Mouse   860 KLCPIPMTPNGHLDPSLPLGGHLGPAGAMGAAPRLSLQPDPVLVALESRKSSVMSLGRMSYDQRS 924

  Fly  1068 ------------GRFKSWVKRNIADCFKLIRNKLTNQISDQPSGERTNQISWIWSEGKGVCRCIS 1120
                        ||..:|..|.  ..:..:::|       .||.|..:.:|     |:....|:.
Mouse   925 LSSSRSSYYGPWGRSGTWASRR--SSWNSLKHK-------PPSAEHESLLS-----GERGGSCVR 975

  Fly  1121 AEHGDNE--------LELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKSKY 1177
            |..|..|        |...|......|                       .|...::...:::..
Mouse   976 ACEGAREDAPPRAAPLHAPHTHHAHHG-----------------------PHLAHRHRHHRRTLS 1017

  Fly  1178 LNNATDDDTAS-INSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEELDEEGECEEGP 1241
            |:.....|.|. :...|:|....::........|...|.....|......:|:..| .||.||  
Mouse  1018 LDTRDSVDLAELVPVVGAHSRAAWRAAGQAPGHEDCNGRMPNIAKDVFTKMDDRRD-RGEDEE-- 1079

  Fly  1242 LDGDIIIHAHDEDILDEYPADCC------------PDSYYKKFPILAGDDDSPFWQGWGNLRLKT 1294
             :.|..:......::|.|..|.|            |::   ||.||..                 
Mouse  1080 -EIDYTLCFRVRKMIDVYKPDWCEVREDWSVYLFSPEN---KFRILCQ----------------- 1123

  Fly  1295 FQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGF 1359
             .:|.:|.|:..|:..|.::.:.:|||...:......:..|...:.|||.||..||.:|.::||.
Mouse  1124 -TIIAHKLFDYVVLAFIFLNCITIALERPQIEAGSTERIFLTVSNYIFTAIFVGEMTLKVVSLGL 1187

  Fly  1360 ----KVYFTNAWCWLDFVIVMVSLINFVASLVGAGG---IQAFKTMRTLRALRPLRAMSRMQGMR 1417
                :.|..::|..||..:|.||:|:.|.|:..|||   :...:.:|.||.|||||.:||..|::
Mouse  1188 YFGEQAYLRSSWNVLDGFLVFVSIIDIVVSVASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLK 1252

  Fly  1418 VVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNACESEN 1482
            :||..|:.::..|.|::|:|..|::||.|:|||||.||::.|..::...     |.||:.|.:.|
Mouse  1253 LVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYHCLGVDTRN-----ITNRSDCVAAN 1312

  Fly  1483 YTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFG 1547
            |.||:...|||::|.|.:.||.:|:..||:.||.:.:|:..||:||:...|.:|.|||:.|::..
Mouse  1313 YRWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYNGLDAVAVDQQPVTNHNPWMLLYFISFLLIV 1377

  Fly  1548 SFFTLNLFIGVIIDNFNE--QKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWR--- 1607
            |||.||:|:||:::||::  |.::|        .|.:::....:::: .||..||...|.:.   
Mouse  1378 SFFVLNMFVGVVVENFHKCRQHQEA--------EEARRREEKRLRRL-EKKRRKAQRLPYYATYC 1433

  Fly  1608 -PQAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKI- 1670
             .:.::..:.|....||.|...|.||:.||:|:.|:...:....|.|.|.:|..:|..|.:||: 
Mouse  1434 PTRLLIHSMCTSHYLDIFITFIICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLKLV 1498

  Fly  1671 -FALRYHYFIEPWNLFDVVVVILSILGLVLSDI-IEKYF-VSPTLLRVVRVAKVGRVLRLVKGAK 1732
             |.|| .:|.:.||..|:.:|:||::|:.|.:| |.... ::||::|::||.::.|||:|:|.|.
Mouse  1499 AFGLR-RFFKDRWNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARVLKLLKMAT 1562

  Fly  1733 GIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHV-----KEKSGINDVYNFKTFGQSM 1792
            |:|.||..:..:||.:.|:.||..|:.||:|..|:..|..:     ....|::....|:.||.:.
Mouse  1563 GMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGMSRHATFENFGMAF 1627

  Fly  1793 ILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSAT--VGITFLLSYLVISFLIVINMY 1855
            :.|||:||...|:|::...:.:  |...:.      :|.|:.  |...:.:|:::.:..::||:.
Mouse  1628 LTLFQVSTGDNWNGIMKDTLRD--CTHDER------SCLSSLQFVSPLYFVSFVLTAQFVLINVV 1684

  Fly  1856 IAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDP----------------------------- 1891
            :||::::...:.::.||. .:.|.::..|:.....|                             
Mouse  1685 VAVLMKHLDDSNKEAQED-AEMDAEIELEMAHGLGPGPGPCPCPCPCPCPCPCPGPRMPTSSPGA 1748

  Fly  1892 --------------------------------EGTQYIRYDQLSEFLDVLE-------------- 1910
                                            :....|..|.|...|.:::              
Mouse  1749 PGRGSGGAGVGGDTESHLCRHCYSPAQETLWLDSVSLIIKDSLEGELTIIDNLSGSIFHHYSSPA 1813

  Fly  1911 ------------------------------------PPLQIHKPNKYKI-------------ISM 1926
                                                |.:|:.:...:.:             :|:
Mouse  1814 GCDKCHHDKQEGPVAQRSRPRLPHPSPRVTRGHHLPPQVQLAETEAFSLNSDRSSSVLLGDDLSL 1878

  Fly  1927 DIPIC-------------------RGDLMYCVDILDALTKDFFARKGNPIEETGE--IGEIAARP 1970
            :.|..                   .|||..|          ||...|.|:....|  :.|:.|.|
Mouse  1879 EDPTACPQGPKESKGELEPPEPMQAGDLDEC----------FFPFAGEPVSAGPESLLCEMGAIP 1933

  Fly  1971 DTEGYEPVSSTLWRQREEYCARLIQHAWRKHKARGEGGGSFEPDTDHGDGGDP------DAGDPA 2029
                :.||.|                 |.||::.......|.|     ||..|      :...||
Mouse  1934 ----FNPVQS-----------------WLKHESNQAPPSPFSP-----DGSSPLLQMPAEFFHPA 1972

  Fly  2030 PDEATDGDAPAGGDGSVNGTAEGAADADESNVNSPGEDAAAAAAAAAAAAAAGTTTAGSPGAGSA 2094
            ...:..|..|....|::   .:.|.....:::.||    :........|..:.|:...||.:.:.
Mouse  1973 VSASQKGQEPGMSSGTL---PKIALQGSWASLRSP----SVNCTLLRQATVSDTSLDASPSSSAG 2030

  Fly  2095 GRQTAV 2100
            ..||.:
Mouse  2031 SLQTTL 2036

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
paraNP_001259619.1 Ion_trans 152..436 CDD:459842 88/341 (26%)
Na_trans_cytopl 555..740 CDD:463401 15/185 (8%)
Ion_trans 817..1028 CDD:459842 74/218 (34%)
Na_trans_assoc 1054..1296 CDD:461936 45/348 (13%)
Ion_trans 1300..1571 CDD:459842 103/279 (37%)
Na_channel_gate 1561..1613 CDD:240441 10/57 (18%)
Ion_trans 1621..1871 CDD:459842 78/260 (30%)
GPHH 1882..1929 CDD:465306 9/170 (5%)
Cacna1iXP_006521012.1 Ion_trans 76..407 CDD:459842 88/345 (26%)
Ion_trans 597..824 CDD:459842 81/234 (35%)
Ion_trans 1128..1400 CDD:459842 103/276 (37%)
Ion_trans 1445..1700 CDD:459842 78/263 (30%)
PHA03307 1867..>2226 CDD:223039 39/213 (18%)

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