DRSC/TRiP Functional Genomics Resources

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Protein Alignment para and Tpcn2

DIOPT Version :9

Sequence 1:NP_001259619.1 Gene:para / 32619 FlyBaseID:FBgn0285944 Length:2145 Species:Drosophila melanogaster
Sequence 2:XP_006508676.1 Gene:Tpcn2 / 233979 MGIID:2385297 Length:769 Species:Mus musculus


Alignment Length:758 Identity:145/758 - (19%)
Similarity:263/758 - (34%) Gaps:279/758 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1346 FFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAM 1410
            |.:::.:|...:|......|.|....|::::||:::::.||    .:...:.:|..|.|||...:
Mouse   120 FLVDLSVKGYLVGQAQLQQNLWLLAYFMVLVVSVVDWIVSL----SLACEEPLRMRRLLRPFFLL 180

  Fly  1411 SRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFA-GKYFKCEDMNGTKLSHEIIPN 1474
            .....|:..:..:..::|.:.:|.|:..|...:|.|:|:.||. |:..:.:|..  :|::     
Mouse   181 QNSSMMKKTLKCIRWSLPEMASVGLLLAIHLCLFTIIGMLLFTIGEKDEAQDQE--RLAY----- 238

  Fly  1475 RNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLY 1539
                             |.::..|...|..:.|......:|           .|....|....|:
Mouse   239 -----------------FRNLPEALTSLLVLLTTSNNPDVM-----------IPAYTQNRAFALF 275

  Fly  1540 FVFFIIFGSFFTLNLFIGVIIDNFNEQKKK--------------------------AGGSLE--- 1575
            |:.|.:.||.|.:||...:|.:.|.....|                          ||.:.|   
Mouse   276 FIVFTLIGSLFLMNLLTAIIYNQFRGYLMKSLQTSLFRRRLGARAAYEVLASRAGPAGTTPEFPC 340

  Fly  1576 ----------------------------------------------------------------- 1575
                                                                             
Mouse   341 WPAPDWIFHRELYGLPSPQCFHYPVCSFLLAHLCLRVGVNPETFLPVLQKTQLNKTHKQAIMQKV 405

  Fly  1576 -------MFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRP---QAIVFEIVTDKKFDII------ 1624
                   |...|.||.:....|.:..::|||    |:::.   |...| |.:...||.:      
Mouse   406 QSYEGRPMLADEFQKLFDEVDKGLAKERPLK----PQYQSPFLQTAQF-IFSHHYFDYLGNLVAL 465

  Fly  1625 -----IMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFA------LRYHYF 1678
                 |.:|:.|:...:..:|   .|....:|||   ||::.:..|.|.|:||      |.||. 
Mouse   466 GNLLSICVFLVLDSDLLPGER---DDFVLGILDY---IFILYYLLELLFKVFALGLPGYLSYHS- 523

  Fly  1679 IEPWNLFDVVVVILSILGLVLSDII--------------EKYFVSPTLL----RVVRVAKVGRVL 1725
                |:||.::.|:    |::|:|.              |:|  .|..|    |::....|.|.|
Mouse   524 ----NVFDGLLTII----LLVSEICTLAVYRLPHSGWKPEQY--GPLSLWDMTRLMNTLIVFRFL 578

  Fly  1726 RLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVY------- 1783
            |::...|.:..:...:...:|.|.....:|.:..::||:.|::.|..|....|.:.:.       
Mouse   579 RIIPNIKPMAEVANTILGLIPNLRAFGGILVVAYYVFAMIGINLFRGVIVPPGNSSLVPDNNSAV 643

  Fly  1784 ------------NFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVG 1836
                        ||..|..::|.|:.:.....|..:|:|.            |.|.|....    
Mouse   644 CGSFEQLGYWPNNFDDFAAALITLWNVMVVNNWQVILEAY------------KRYAGPWSM---- 692

  Fly  1837 ITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQ--YIRY 1899
            :.|:|.:|| |.:|.||:::|::|||:                      ..::||:|.:  .:..
Mouse   693 VYFVLWWLV-SSVIWINLFLALLLENF----------------------LHRWDPQGHKQLLVGT 734

  Fly  1900 DQLS---EFLDVLEPPLQ------IHK-PNKYKIISMDIPICR 1932
            .|:|   .|.|:||.|.:      :|| |:        :.:||
Mouse   735 KQMSVELMFRDILEEPKEEELMEKLHKHPH--------LHLCR 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
paraNP_001259619.1 Ion_trans 165..436 CDD:278921
Na_trans_cytopl 515..648 CDD:288761
Ion_trans 835..1028 CDD:278921
Na_trans_assoc 1054..1296 CDD:284034
Ion_trans 1318..1571 CDD:278921 46/251 (18%)
Na_channel_gate 1561..1613 CDD:240441 15/155 (10%)
Ion_trans 1636..1871 CDD:278921 64/277 (23%)
GPHH 1880..1930 CDD:293510 13/61 (21%)
Tpcn2XP_006508676.1 Ion_trans 68..299 CDD:366146 44/217 (20%)
Ion_trans 453..718 CDD:366146 68/298 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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