Sequence 1: | NP_001259619.1 | Gene: | para / 32619 | FlyBaseID: | FBgn0285944 | Length: | 2145 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001342095.1 | Gene: | Scn3a / 20269 | MGIID: | 98249 | Length: | 1996 | Species: | Mus musculus |
Alignment Length: | 2149 | Identity: | 967/2149 - (44%) |
---|---|---|---|
Similarity: | 1314/2149 - (61%) | Gaps: | 279/2149 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 FRPFTRESLVQIEQRIAAEHEKQKELERKRAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLE 80
Fly 81 QGVPIPVRLQGSFPPELASTPLEDIDPYYSNVLTFVVVSKGKDIFRFSASKAMWMLDPFNPIRRV 145
Fly 146 AIYILVHPLFSLFIITTILVNCILMIMPTTPT-VESTEVIFTGIYTFESAVKVMARGFILCPFTY 209
Fly 210 LRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV 274
Fly 275 IILTMFSLSVFALMGLQIYMGVLTQKCIKKFPLD------------------GSWGNLTDE--NW 319
Fly 320 DYHNRNSSNWYSEDEGISFP-LCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFR 383
Fly 384 LMTQDFWEDLYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEE 448
Fly 449 A---------IREAEEAAAAKAAKLEER-------------ANAQAQAAADAAAAE--------- 482
Fly 483 -----EAALHPE---MAKSPTYSCISYELFVGGEKGNDDNNKEKMSIRSVEVESESVSVIQRQPA 539
Fly 540 PTTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTYQDAQ 604
Fly 605 QHLPYADDSNAVTPMSE-ENGAIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGGMAVMGVST 668
Fly 669 MTKESKLRNRNTRNQSVGATNGGTTCLDTNHKLDHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQ 733
Fly 734 TVV---DMKDVMVLNDIIEQAAGRHSRASDRGVSVYYFPT---EDDDEDGPTFKDKALEVILKGI 792
Fly 793 DVFCVWDCCWVWLKFQEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFF 857
Fly 858 TATFAIEATMKLMAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKS 922
Fly 923 WPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRF-PDGDLPRWNFTDF 986
Fly 987 MHSFMIVFRVLCGEWIESMWDCMYV-GDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSA 1050
Fly 1051 PTADNDTNKIAEAFNRIGRFKSWVKRNIADCFK--LIRNKLTNQISDQPSGERTNQISWIWSEGK 1113
Fly 1114 GVCRCISAEHGDNEL--ELGHDEILADGL-IKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKS 1175
Fly 1176 KYLNNATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEELDEEGECEEG 1240
Fly 1241 PLDGDIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFET 1305
Fly 1306 AVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWL 1370
Fly 1371 DFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLL 1435
Fly 1436 VCLIFWLIFAIMGVQLFAGKYFKCEDM-NGTKLSHEIIPNRNACES--ENYTWVNSAMNFDHVGN 1497
Fly 1498 AYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDN 1562
Fly 1563 FNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIML 1627
Fly 1628 FIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVIL 1692
Fly 1693 SILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFL 1757
Fly 1758 VMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEA--CDPP 1820
Fly 1821 DNDKGYP-----GNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYD 1880
Fly 1881 MYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDILDAL 1945
Fly 1946 TKDFFARKGNPIEETGEIGEI---------AARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKH 2001
Fly 2002 --KARGEG-GGSFEPDTDHGDGGDPDAGDPAPDEATDGDAPAGGDGSVNGTAEGAADADESNVNS 2063
Fly 2064 PGED 2067 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
para | NP_001259619.1 | Ion_trans | 165..436 | CDD:278921 | 168/292 (58%) |
Na_trans_cytopl | 515..648 | CDD:288761 | 28/133 (21%) | ||
Ion_trans | 835..1028 | CDD:278921 | 124/194 (64%) | ||
Na_trans_assoc | 1054..1296 | CDD:284034 | 52/246 (21%) | ||
Ion_trans | 1318..1571 | CDD:278921 | 160/255 (63%) | ||
Na_channel_gate | 1561..1613 | CDD:240441 | 35/51 (69%) | ||
Ion_trans | 1636..1871 | CDD:278921 | 147/241 (61%) | ||
GPHH | 1880..1930 | CDD:293510 | 25/49 (51%) | ||
Scn3a | NP_001342095.1 | Ion_trans | 127..434 | CDD:306908 | 177/309 (57%) |
Na_trans_cytopl | 510..697 | CDD:314757 | 51/275 (19%) | ||
Ion_trans | 759..972 | CDD:306908 | 137/212 (65%) | ||
Na_trans_assoc | 998..1201 | CDD:310839 | 52/245 (21%) | ||
Ion_trans | 1206..1478 | CDD:306908 | 167/271 (62%) | ||
Na_channel_gate | 1470..1522 | CDD:240441 | 36/52 (69%) | ||
Ion_trans | 1526..1782 | CDD:306908 | 157/258 (61%) | ||
GPHH | 1786..1849 | CDD:318993 | 31/62 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 346 | 1.000 | Domainoid score | I1042 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1639 | 1.000 | Inparanoid score | I81 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG52281 | |
OrthoDB | 1 | 1.010 | - | - | D37221at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000268 | |
OrthoInspector | 1 | 1.000 | - | - | otm43765 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100419 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10037 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X214 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.880 |