DRSC/TRiP Functional Genomics Resources

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Protein Alignment para and CATSPER2

DIOPT Version :9

Sequence 1:NP_001259619.1 Gene:para / 32619 FlyBaseID:FBgn0285944 Length:2145 Species:Drosophila melanogaster
Sequence 2:NP_001269239.1 Gene:CATSPER2 / 117155 HGNCID:18810 Length:534 Species:Homo sapiens


Alignment Length:311 Identity:76/311 - (24%)
Similarity:154/311 - (49%) Gaps:57/311 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1284 WQGWGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHL---------PQRPILQDILYYMD 1339
            |.||         ::|...|:..:|.::.::::.|.:| :.|         |.:..|:...::: 
Human   106 WAGW---------VLECPLFKNFIIFLVFLNTIILMVE-IELLESTNTKLWPLKLTLEVAAWFI- 159

  Fly  1340 RIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAF-KTMRTLRA 1403
               .:||.||:|:|||: .|.|::.:||...|||:.|:||:..|..|||..|...: :.:|..|.
Human   160 ---LLIFILEILLKWLS-NFSVFWKSAWNVFDFVVTMLSLLPEVVVLVGVTGQSVWLQLLRICRV 220

  Fly  1404 LRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLS 1468
            ||.|:.:::.:.:::::..||:|:.|:..:|::.|||:.|||:.||.:|: :|.:....:   |.
Human   221 LRSLKLLAQFRQIQIIILVLVRALKSMTFLLMLLLIFFYIFAVTGVYVFS-EYTRSPRQD---LE 281

  Fly  1469 HEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETN 1533
            :.:.                   |..:.|:.:.:|.:.|...|..::.|.....||.:       
Human   282 YHVF-------------------FSDLPNSLVTVFILFTLDHWYALLQDVWKVPEVSR------- 320

  Fly  1534 IYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKK 1584
            |:..:||:.:::.||....::.:.:::.||...:|:.  :.||...|.|.|
Human   321 IFSSIYFILWLLLGSIIFRSIIVAMMVTNFQNIRKEL--NEEMARREVQLK 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
paraNP_001259619.1 Ion_trans 165..436 CDD:278921
Na_trans_cytopl 515..648 CDD:288761
Ion_trans 835..1028 CDD:278921
Na_trans_assoc 1054..1296 CDD:284034 3/11 (27%)
Ion_trans 1318..1571 CDD:278921 65/262 (25%)
Na_channel_gate 1561..1613 CDD:240441 8/24 (33%)
Ion_trans 1636..1871 CDD:278921
GPHH 1880..1930 CDD:293510
CATSPER2NP_001269239.1 Ion_trans 178..356 CDD:278921 49/207 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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