Sequence 1: | NP_001259619.1 | Gene: | para / 32619 | FlyBaseID: | FBgn0285944 | Length: | 2145 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008765754.2 | Gene: | Cacna1h / 114862 | RGDID: | 68943 | Length: | 2370 | Species: | Rattus norvegicus |
Alignment Length: | 2339 | Identity: | 557/2339 - (23%) |
---|---|---|---|
Similarity: | 975/2339 - (41%) | Gaps: | 550/2339 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 143 RRVAIYILVHPLFSLFIITTILVNCIL--MIMPTTPT---------VESTEVIFTGIYTFESAVK 196
Fly 197 VMARGFI--LCPFTYLRDAWNWLDFVVIALAYVTMGIDLGN--LAALRTFRVLRALKTVAIVPGL 257
Fly 258 KTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYH 322
Fly 323 NRNSS---NWYSEDEGISFPL------------CGNIS----------------GAGQCDD---- 352
Fly 353 --------DY--VCLQG-FGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGPWHM 406
Fly 407 LFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKAAKLEERANAQ 471
Fly 472 AQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKMSIRSVEVESESVSVIQR 536
Fly 537 QPAP-TTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSS--------------HKYTIRNGRGRFG 586
Fly 587 IPGSDRKPLVLSTYQDAQQHLPYADDSNAV------TPMSEENG----AIIVPVYYGNL---GSR 638
Fly 639 HSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNR-NTRNQSVGATNGGTTCLDTN---- 698
Fly 699 -------HKLDHRDYEIGLECTDEAGKIKHHDN------PFIEPVQTQTVVDMKD----VMVLND 746
Fly 747 IIEQAAGRHSRASDRGVSVYYF-----------PTEDDDEDG-PTFKDKALEVILK------GID 793
Fly 794 VFCVWDCCWVWLKFQEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFT 858
Fly 859 ATFAIEATMKLMAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSW 923
Fly 924 PTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYH---DHKDRFPDGDLPRWNFTD 985
Fly 986 FMHSFMIVFRVLCGE-W---------IESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLALLL 1040
Fly 1041 SNF---GSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSGERT 1102
Fly 1103 NQISWIWSEGKG----------VCRCISAEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGD 1157
Fly 1158 GMEFTIHGDMKNNKPKKSKYL-----NNATDDDTASINSYGSHKNRPFKDESHKGSAETM---EG 1214
Fly 1215 EEKRDASKED-------------------LGLDEELDEEGE---CEEGP----------LDGDII 1247
Fly 1248 ---------IHAHDEDIL---DEYPADCCPDSYYKKFPILAGDDDSPFW----QGW--------G 1288
Fly 1289 NLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIK 1353
Fly 1354 WLALGF----KVYFTNAWCWLDFVIVMVSLINFVASLVGAGG---IQAFKTMRTLRALRPLRAMS 1411
Fly 1412 RMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRN 1476
Fly 1477 ACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFV 1541
Fly 1542 FFIIFGSFFTLNLFIGVIIDNFNE--QKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRP 1604
Fly 1605 RWRP--------QAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVI 1661
Fly 1662 FSSECLLKIFALRY-HYFIEPWNLFDVVVVILSILGLVLSDIIEKYF--VSPTLLRVVRVAKVGR 1723
Fly 1724 VLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF--MHVKEKS---GINDVY 1783
Fly 1784 NFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGIT--FLLSYLVI 1846
Fly 1847 SFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEP 1911
Fly 1912 P-LQIHKPNKYKIISMDIPICRGDLMYCVDILDALTKDFF---------ARKGNPIEETGEIGEI 1966
Fly 1967 AARPDTEGYEP------------VSSTLWRQREEYCA-------------RLIQHAWRKHKARGE 2006
Fly 2007 G-----GGSFEPD---------TDHGDGGDPDAGDPAPDEA-------TDGD-------APAGGD 2043
Fly 2044 GSVNGTAEGAADADE--SNVNS-----PGEDAAAAAAAAAAAAAAGTTTAG-------------- 2087
Fly 2088 --SPGAGSAGRQTAVLVESDGFVTKNGHKVVIHSRS----PSITSRTADVXARP----RPPLQD 2141 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
para | NP_001259619.1 | Ion_trans | 165..436 | CDD:278921 | 84/331 (25%) |
Na_trans_cytopl | 515..648 | CDD:288761 | 26/160 (16%) | ||
Ion_trans | 835..1028 | CDD:278921 | 69/205 (34%) | ||
Na_trans_assoc | 1054..1296 | CDD:284034 | 55/315 (17%) | ||
Ion_trans | 1318..1571 | CDD:278921 | 97/261 (37%) | ||
Na_channel_gate | 1561..1613 | CDD:240441 | 11/61 (18%) | ||
Ion_trans | 1636..1871 | CDD:278921 | 67/244 (27%) | ||
GPHH | 1880..1930 | CDD:293510 | 7/50 (14%) | ||
Cacna1h | XP_008765754.2 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |