Sequence 1: | NP_001259619.1 | Gene: | para / 32619 | FlyBaseID: | FBgn0285944 | Length: | 2145 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012826731.2 | Gene: | scn1a / 100488621 | XenbaseID: | XB-GENE-978019 | Length: | 2020 | Species: | Xenopus tropicalis |
Alignment Length: | 2075 | Identity: | 955/2075 - (46%) |
---|---|---|---|
Similarity: | 1293/2075 - (62%) | Gaps: | 236/2075 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 FRPFTRESLVQIEQRIAAEHEKQKELERKRAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLE 80
Fly 81 QGVPIPVRLQGSFPPELASTPLEDIDPYYSNVLTFVVVSKGKDIFRFSASKAMWMLDPFNPIRRV 145
Fly 146 AIYILVHPLFSLFIITTILVNCILMIMPTTPT-VESTEVIFTGIYTFESAVKVMARGFILCPFTY 209
Fly 210 LRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV 274
Fly 275 IILTMFSLSVFALMGLQIYMGVLTQKCIKKFPLD------------------GSWGNLTDE--NW 319
Fly 320 DYHNRNSSNWYSEDEGISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRL 384
Fly 385 MTQDFWEDLYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEA 449
Fly 450 ---------IREAEEAAAAKAAKLEERANAQAQAAADA-------AAAEEAALHPEMAK---SPT 495
Fly 496 YSCISYELFVGGEKGNDDNNKEKMSIRSVE-------VESESVSVIQRQPAPTTAHQATKVRKVS 553
Fly 554 TTSLSLPGSPFNIRRGSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTP 618
Fly 619 MSE-ENGAIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRN 682
Fly 683 QSVGATNGGTTCLDTNHKLDHRDYEIGLECTDEAGKIKHH---DNPFIEPVQTQTVVDMKD---- 740
Fly 741 -VMVLNDIIEQAAGRHSRASDRGVSVYYFPT---EDDDEDGPTFKDKALEVILKGIDVFCVWDCC 801
Fly 802 WVWLKFQEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEAT 866
Fly 867 MKLMAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLIS 931
Fly 932 IMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDG-DLPRWNFTDFMHSFMIVFR 995
Fly 996 VLCGEWIESMWDCMYV-GDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADNDTNK 1059
Fly 1060 IAEAFNRIGRFKSWVKRNIADCFK---LIRNKLTNQISDQPSGERTN-QISWIWSEGK-GVCRCI 1119
Fly 1120 SAEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKP---KKSKYLNNA 1181
Fly 1182 TDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEELDEEGECEEG---PLD 1243
Fly 1244 GDIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFETAVI 1308
Fly 1309 TMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFV 1373
Fly 1374 IVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCL 1438
Fly 1439 IFWLIFAIMGVQLFAGKYFKC-EDMNGTKLSHEIIPNRNAC--ESENYTWVNSAMNFDHVGNAYL 1500
Fly 1501 CLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNE 1565
Fly 1566 QKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIMLFIG 1630
Fly 1631 LNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSIL 1695
Fly 1696 GLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMF 1760
Fly 1761 IFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEA--CDPPDND 1823
Fly 1824 KG--YPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIW 1886
Fly 1887 QQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDILDALTKDFFA 1951
Fly 1952 RKGN-------PIEETGEIGEIAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKAR 2004 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
para | NP_001259619.1 | Ion_trans | 165..436 | CDD:278921 | 163/291 (56%) |
Na_trans_cytopl | 515..648 | CDD:288761 | 30/140 (21%) | ||
Ion_trans | 835..1028 | CDD:278921 | 125/194 (64%) | ||
Na_trans_assoc | 1054..1296 | CDD:284034 | 53/252 (21%) | ||
Ion_trans | 1318..1571 | CDD:278921 | 162/255 (64%) | ||
Na_channel_gate | 1561..1613 | CDD:240441 | 35/51 (69%) | ||
Ion_trans | 1636..1871 | CDD:278921 | 146/238 (61%) | ||
GPHH | 1880..1930 | CDD:293510 | 26/49 (53%) | ||
scn1a | XP_012826731.2 | Ion_trans | 128..435 | CDD:395416 | 172/308 (56%) |
Na_trans_cytopl | 515..723 | CDD:403218 | 54/277 (19%) | ||
Ion_trans | 772..985 | CDD:395416 | 138/212 (65%) | ||
Na_trans_assoc | 1011..1222 | CDD:399489 | 53/252 (21%) | ||
Ion_trans | 1226..1498 | CDD:395416 | 170/271 (63%) | ||
Na_channel_gate | 1490..1542 | CDD:240441 | 36/52 (69%) | ||
Ion_trans | 1547..1802 | CDD:395416 | 157/254 (62%) | ||
GPHH | 1814..1861 | CDD:407139 | 25/46 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 345 | 1.000 | Domainoid score | I1047 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1626 | 1.000 | Inparanoid score | I77 |
OMA | 1 | 1.010 | - | - | QHG52281 | |
OrthoDB | 1 | 1.010 | - | - | D37221at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000268 | |
OrthoInspector | 1 | 1.000 | - | - | otm48939 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10037 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X214 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 10.080 |