Sequence 1: | NP_001259619.1 | Gene: | para / 32619 | FlyBaseID: | FBgn0285944 | Length: | 2145 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012826714.1 | Gene: | scn3a / 100125099 | XenbaseID: | XB-GENE-5812330 | Length: | 2019 | Species: | Xenopus tropicalis |
Alignment Length: | 2125 | Identity: | 964/2125 - (45%) |
---|---|---|---|
Similarity: | 1300/2125 - (61%) | Gaps: | 221/2125 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 RPFTRESLVQIEQRIAAEHEKQKELERKRAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLEQ 81
Fly 82 GVPIPVRLQGSFPPELASTPLEDIDPYYSNVLTFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVA 146
Fly 147 IYILVHPLFSLFIITTILVNCILMIMPTTPT-VESTEVIFTGIYTFESAVKVMARGFILCPFTYL 210
Fly 211 RDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVI 275
Fly 276 ILTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSW-----GNLTDENWDYHNR----------- 324
Fly 325 --NSSNWYSEDEGISF-P------LCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLS 380
Fly 381 AFRLMTQDFWEDLYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAA 445
Fly 446 EEEAIREAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKG 510
Fly 511 NDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSH- 574
Fly 575 -KYTIRNG-----RGRFGIPGSDRKPLVLS---TYQDAQQHLPYADDSNAVTPMSE-ENGAIIVP 629
Fly 630 VYYGNLGSRHSSYTSHQSR------ISYTSHG--DLLGGMAVM-GVSTMTKESKLRNRNTRNQSV 685
Fly 686 GATNGGTTCLDTNHKLDHR---DYEIGLECTDEAGKIKHHDNPFIE-PVQTQTVVDMKDVMVLND 746
Fly 747 IIEQAAGRHSRASDRGVSVYYFPTEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKFQEWV 811
Fly 812 SLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATMKLMAMSPKY 876
Fly 877 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALG 941
Fly 942 NLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRF-PDG-DLPRWNFTDFMHSFMIVFRVLCGEWIES 1004
Fly 1005 MWDCMYV-GDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADNDTNKIAEAFNRIG 1068
Fly 1069 RFKSWVKRNIADCFKLIRNKLTNQISDQPSGERTNQISWIWSEGKGVCRCISAEHGDNELELGHD 1133
Fly 1134 EILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKSKYLNNATDDDTASINSYGSHKNR 1198
Fly 1199 PFKDESHKGSAETMEGEEKRDASKEDLGLDEELDEEGECEEGPLDGDIIIHAHDEDILDEYPADC 1263
Fly 1264 CPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQR 1328
Fly 1329 PILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQ 1393
Fly 1394 AFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFK 1458
Fly 1459 CEDMNGTK---LSHEIIPNRNACE---SENYT--WVNSAMNFDHVGNAYLCLFQVATFKGWIQIM 1515
Fly 1516 NDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTE 1580
Fly 1581 DQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYDASD 1645
Fly 1646 TYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSP 1710
Fly 1711 TLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKE 1775
Fly 1776 KSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEA--CDPPDNDKG--YPGNCGSATVG 1836
Fly 1837 ITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQ 1901
Fly 1902 LSEFLDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDILDALTK------DFFARKGNPIEET 1960
Fly 1961 GEIGEIAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKAR-GEGGGSFEPDTDHG-DGGDP 2023
Fly 2024 DAGDPAPDEATDGDAPAGGDGSVNGTAEGAADADESNVNSPGEDA 2068 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
para | NP_001259619.1 | Ion_trans | 165..436 | CDD:278921 | 169/296 (57%) |
Na_trans_cytopl | 515..648 | CDD:288761 | 33/143 (23%) | ||
Ion_trans | 835..1028 | CDD:278921 | 122/195 (63%) | ||
Na_trans_assoc | 1054..1296 | CDD:284034 | 53/241 (22%) | ||
Ion_trans | 1318..1571 | CDD:278921 | 164/260 (63%) | ||
Na_channel_gate | 1561..1613 | CDD:240441 | 34/51 (67%) | ||
Ion_trans | 1636..1871 | CDD:278921 | 147/238 (62%) | ||
GPHH | 1880..1930 | CDD:293510 | 23/49 (47%) | ||
scn3a | XP_012826714.1 | Ion_trans | 151..430 | CDD:278921 | 166/291 (57%) |
Na_trans_cytopl | 512..627 | CDD:288761 | 26/115 (23%) | ||
Ion_trans | 786..982 | CDD:278921 | 122/195 (63%) | ||
Na_trans_assoc | 1008..1216 | CDD:284034 | 53/240 (22%) | ||
Ion_trans | 1239..1496 | CDD:278921 | 162/258 (63%) | ||
Na_channel_gate | 1488..1540 | CDD:240441 | 35/52 (67%) | ||
Ion_trans | 1562..1800 | CDD:278921 | 147/237 (62%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 345 | 1.000 | Domainoid score | I1047 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H75001 | |
Inparanoid | 1 | 1.050 | 1626 | 1.000 | Inparanoid score | I77 |
OMA | 1 | 1.010 | - | - | QHG52281 | |
OrthoDB | 1 | 1.010 | - | - | D37221at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000268 | |
OrthoInspector | 1 | 1.000 | - | - | otm48939 | |
Panther | 1 | 1.100 | - | - | O | PTHR10037 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X214 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 11.080 |