DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment S-Lap4 and lap3

DIOPT Version :9

Sequence 1:NP_729613.1 Gene:S-Lap4 / 326188 FlyBaseID:FBgn0052064 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001108319.1 Gene:lap3 / 562854 ZFINID:ZDB-GENE-060719-1 Length:517 Species:Danio rerio


Alignment Length:494 Identity:204/494 - (41%)
Similarity:299/494 - (60%) Gaps:14/494 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SKSSKGLVVGVYQKENDND-PKLTPAGEKVNDRLHGKLQEMICQSKITGHLGRGKIFNNIDPEFR 95
            |.:.||||:|||::::|:| ..||.|....:..|.|:|.||:..|......|:.:||..:..:|.
Zfish    28 SSTRKGLVLGVYEQQSDSDGVSLTEAAAAFDRSLSGRLSEMLSLSGPPLKKGKSRIFYGLHQDFP 92

  Fly    96 SMAVVGVGLEGIGFNELEMLDEGMENVRVAAGIGARSLQEIGVSEVFVDGMDYAEQAAEGAVLAV 160
            |:.|||:|....|....|..|...||:|.|...|.|.||::.|:.|.||.....:.|||||||.:
Zfish    93 SVVVVGLGKSDPGVCGKENWDNCKENIRAAVSAGCRQLQDLEVALVEVDPCGDDQSAAEGAVLGL 157

  Fly   161 WRYCDMNSKRKPPHIPKLELYESPDYEGWTRGVFKAEAQNLARRMCDTPACCMTPTLFAQATVD- 224
            :.|.::.:|:| .|: |...:.|.|...|.:||...:.|||||::.:.||..:|||:||. |:: 
Zfish   158 FEYDELKTKKK-VHV-KTRPHGSVDAAAWQKGVLYGDGQNLARQLMEAPANHVTPTVFAN-TIEQ 219

  Fly   225 --ALCPCGITVEIRTMEWIEQQRLHSFLMIAKGSCEPPVLMEITYCGTNPE-DKPILFLGKGITF 286
              :|....:.|..|...|||.:::.:||.::|||.||||.:|:.|.|::.. ..|::.:||||||
Zfish   220 KLSLFADRVIVHKRPQSWIEGEQMGAFLSVSKGSEEPPVFLELHYKGSSDSAQPPLVLVGKGITF 284

  Fly   287 NSGAMNLRKCRGMEEYRACMSGAASCVAMMRCVAALALPINVCCIIPLCENMPSGMACKPGDVVT 351
            :||.::|:...||:..||.|.|||:..:.:...|||.:|||:..:.|||||||||.|.||||||.
Zfish   285 DSGGISLKPSSGMDAMRADMGGAATVCSAIVTAAALKIPINIIGLAPLCENMPSGKANKPGDVVR 349

  Fly   352 LMNHKSMAVRNLDKAGVVVMADPLLYGQSTYKPRLVVDVATLGSGVKKAFGGGATGIFSNSHYIW 416
            ..|.|::.:.|.|..|.:::||.|.|..| :|||.:::.|||...:..|.|..|||:|:||.::|
Zfish   350 AKNGKTIQIDNTDAEGRLILADALCYAHS-FKPRAIINAATLTGAMDVALGSAATGVFTNSDWLW 413

  Fly   417 KQFQSAGALTGDRVWRLPLWNYYRKQITDEMGYDLSNDGR--GLANSCLAAAVLHELVPCVDWAH 479
            ::...|..:|||||||:||:.:|.||:||....||:|.|:  ....:|.|||.|.|.|....|||
Zfish   414 ERLHKASVVTGDRVWRMPLFQHYTKQVTDSALADLNNVGKYSRSGGACTAAAFLKEFVSANHWAH 478

  Fly   480 LDTRGTGLLTKYGLVPYLTAKYMTGRPTRTLAQFLYQMA 518
            ||.  .|::|....|||| .|.|:|||||||.:|:..:|
Zfish   479 LDI--AGVMTNKDEVPYL-RKGMSGRPTRTLVEFIAGLA 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S-Lap4NP_729613.1 PRK00913 31..514 CDD:234863 202/488 (41%)
Peptidase_M17 35..514 CDD:238247 201/485 (41%)
lap3NP_001108319.1 Peptidase_M17 32..510 CDD:238247 201/484 (42%)
PRK00913 34..511 CDD:234863 200/483 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596391
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0260
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D399611at33208
OrthoFinder 1 1.000 - - FOG0001058
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100682
Panther 1 1.100 - - O PTHR11963
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X713
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.710

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