DRSC/TRiP Functional Genomics Resources

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Protein Alignment scramb1 and AIM25

DIOPT Version :10

Sequence 1:NP_648389.3 Gene:scramb1 / 326186 FlyBaseID:FBgn0052056 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_012634.3 Gene:AIM25 / 853563 SGDID:S000003861 Length:327 Species:Saccharomyces cerevisiae


Alignment Length:257 Identity:62/257 - (24%)
Similarity:98/257 - (38%) Gaps:64/257 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 TTI---DQLLVKQKVELLEAFTGFETNNKFTIKNALGQKVYFAAEDNDCCT----RNCCGPARPF 258
            |||   ..:::::::|.:..|.|||..|::.|.:..|.|:....|.:...|    |......|||
Yeast    73 TTILNEPTVIIERQIEFMNVFLGFEQANRYAIMDVNGNKIASMMERDFSITKAIMRQFYRLHRPF 137

  Fly   259 DMRVFDNFQQEVIHMHRPLACSSCLFPCCLQSIEVSAPP------------------GNVIGTIE 305
            .:.||||:...::.:.||       |......|:...||                  |..:|...
Yeast   138 LVDVFDNWGNVIMTIKRP-------FSFINSHIKTIIPPSAYVDNGSDSTHYHDGKEGTTVGETI 195

  Fly   306 QEWSICSPSFRILNHVG------DTVMRIEGPFCTFSLCGDVEFNVVSLTGEKIGKISKQWSGLA 364
            |.|.:....:.:....|      |...:|:.||.:|      :|.|....|:.:..:.:.|.||.
Yeast   196 QNWHLWRRRYELFQKDGVEGSTFDQFGKIDAPFLSF------DFPVTDADGKIMASVDRNWVGLG 254

  Fly   365 REIFTDADFFGINFP------------------LDLDVRMKAVLLGATFLIDAMFFEKAGNQ 408
            ||:|||...:.:.|.                  |.||.|  ||||.....||..:|.:...|
Yeast   255 REMFTDTGVYVVRFDSQRCFDNIYPTEMLSSQVLTLDQR--AVLLANAVSIDFDYFSRHSRQ 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb1NP_648389.3 PHA03378 <12..187 CDD:223065
Scramblase 184..404 CDD:252175 61/251 (24%)
AIM25NP_012634.3 Scramblase 59..310 CDD:252175 61/251 (24%)
Blue background indicates that the domain is not in the aligned region.

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