DRSC/TRiP Functional Genomics Resources

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Protein Alignment scramb1 and PLSCR2

DIOPT Version :9

Sequence 1:NP_648389.3 Gene:scramb1 / 326186 FlyBaseID:FBgn0052056 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_011511324.2 Gene:PLSCR2 / 57047 HGNCID:16494 Length:325 Species:Homo sapiens


Alignment Length:324 Identity:142/324 - (43%)
Similarity:181/324 - (55%) Gaps:48/324 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 YMGGPGGQPPY----AGGPGGQPPYVGG----PGGQPHYGGGAPPPQAFGGYPPGPAGPGGPPNA 146
            ::.||.|...|    ||..|.|..::|.    ||.|..|            ..| |||..|    
Human    39 HLPGPPGHIVYPKHQAGHTGKQADHLGSQAFYPGRQHDY------------LVP-PAGTAG---- 86

  Fly   147 FGGYPPGQPQQPIVTQPGMGPGMGPGMAPQGGPAGDWMSIPTGIPNCPRGLEYLTTIDQLLVKQK 211
                      .|:..|||         .|:|.|   ||..|....|||.|||||:.||.:|:.|:
Human    87 ----------IPVQNQPG---------RPEGVP---WMPAPPPPLNCPPGLEYLSQIDMILIHQQ 129

  Fly   212 VELLEAFTGFETNNKFTIKNALGQKVYFAAEDNDCCTRNCCGPARPFDMRVFDNFQQEVIHMHRP 276
            :||||....||::|.:.|||:.||::||||||.:.|.|||||.:|||.:|:.||..:|||.:.||
Human   130 IELLEVLFSFESSNMYEIKNSFGQRIYFAAEDTNFCIRNCCGRSRPFTLRITDNVGREVITLERP 194

  Fly   277 LACSSCLFPCCLQSIEVSAPPGNVIGTIEQEWSICSPSFRILNHVGDTVMRIEGPFCTFSLCGDV 341
            |.|:.|..|||||.||:.||||..:|.:.|.|..|...|.|.|...:.|::|.||....|....|
Human   195 LRCNCCCCPCCLQEIEIQAPPGVPVGYVTQTWHPCLTKFTIKNQKREDVLKISGPCIVCSCIAGV 259

  Fly   342 EFNVVSLTGE-KIGKISKQWSGLAREIFTDADFFGINFPLDLDVRMKAVLLGATFLIDAMFFEK 404
            :|.:.||..: .:|:|||.|||..||.|||||.|||.||.||||:||||::||.||||.||||:
Human   260 DFEITSLDEQIVVGRISKHWSGFLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFER 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb1NP_648389.3 Sox_C_TAD <61..>129 CDD:288887 13/46 (28%)
Scramblase 184..404 CDD:252175 115/220 (52%)
PLSCR2XP_011511324.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 288 1.000 Domainoid score I1579
eggNOG 1 0.900 - - E1_KOG0621
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 326 1.000 Inparanoid score I2483
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1015148at2759
OrthoFinder 1 1.000 - - FOG0000205
OrthoInspector 1 1.000 - - mtm8657
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23248
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X164
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.930

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