DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32052 and Smpdl3b

DIOPT Version :9

Sequence 1:NP_001303410.1 Gene:CG32052 / 326184 FlyBaseID:FBgn0044328 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001020908.1 Gene:Smpdl3b / 362619 RGDID:1307458 Length:456 Species:Rattus norvegicus


Alignment Length:510 Identity:160/510 - (31%)
Similarity:248/510 - (48%) Gaps:84/510 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ISWLGFLLAYSGLPGAQARIGYFWHISDLHLDTLYSTQGDIYRSCWELARSVSGSNANSAASEP- 69
            :.||.||.:: |:.||:  :|.||||||||||..|:...|..|.|            .||.|:| 
  Rat     4 LGWLIFLASW-GVAGAE--LGRFWHISDLHLDPNYTVSKDPLRVC------------PSAGSQPV 53

  Fly    70 --PGPFGHYNCDSPWRLIESAVKTMKAKQGDNVEFVLWTGDALSH-SAQPLSEQKQHEILRNITE 131
              .||:|.|.|||||.||.|::..||..: ...:|:.||||...| ..:.|.|.....::..:|.
  Rat    54 LNAGPWGDYLCDSPWALINSSIYAMKEIE-PKPDFIFWTGDDTPHVPNERLGEGAVLSMVDRLTN 117

  Fly   132 LLGRSFSSQFIFPVLGHED----------GSGSYRRLGELWRHWLPSEALVTFDQGGYYS--IEQ 184
            |:...|....::..||:.|          .:..|..:.||||.||.:|:...|.:|.:||  :..
  Rat   118 LIKEVFPGTKVYAALGNHDFHPKNQLPAQSNSIYTHVAELWRPWLSNESFTLFKEGAFYSEKLPS 182

  Fly   185 TKSRLRIVALNTNFMRLDPDPDPRASLSLRWPAEYFAEPKASVSSISAEDELLAE--QQWLWLEE 247
            .....|:|.||||.                    |::..:.:..        :|:  ||:.||.:
  Rat   183 PSKTGRVVVLNTNL--------------------YYSSNEQTAG--------MADPGQQFQWLGD 219

  Fly   248 VLTKSKEKQETVYIVGHMPPGVDERHLGTQHNQLTFTERNNQRYLDMVRRFAPVIQGQFFGHLHS 312
            ||:.:....|.|||:||:|||..|:   || ::..|.|..|:.||.:|::...||.||||||.|:
  Rat   220 VLSNASRNGEMVYIIGHVPPGFFEK---TQ-DKAWFRESFNEEYLKVVQQHHRVIAGQFFGHHHT 280

  Fly   313 DTFRLIYDAKGNPISWLMIAPSIVPRKAG----IGSSNNPALRLYKFDTGSGQVLDYTQFWLDLP 373
            |:||:.|.:.|.|||.:.:.|.:.|.|..    :..:||||:|::::|..:..:.|...::|:|.
  Rat   281 DSFRMFYSSTGAPISVMFLTPGVTPWKTTLPGVVDGANNPAIRIFEYDRATLNLKDMVTYYLNLR 345

  Fly   374 LANRANEPTWQPEYNLTHYYALPEISAVALHNFAERFTGTDLSWFTRYHRANAVRYHSGSACPGL 438
            .|:....|.|:.||.||..|.:.:.|..:::....|. .::.....||:..|:|.| |...|..:
  Rat   346 QADTQETPQWEQEYRLTEAYEVQDASTSSMYTALTRI-ASEQHILQRYYVYNSVSY-SHQPCEDV 408

  Fly   439 CMLNHYCAITRLDYDEFRICLEKEQLALQGRAPAALMPTSWSWLLGVLAVFYGLH 493
            |...|.|||..:::|.:..||.        ...|.|:|   .:|| :|.:...||
  Rat   409 CRREHVCAIQHVEFDTYATCLH--------GLGANLVP---GFLL-ILTLLTSLH 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32052NP_001303410.1 MPP_ASMase 28..351 CDD:277321 114/344 (33%)
Smpdl3bNP_001020908.1 Metallophos 22..281 CDD:278574 99/303 (33%)
MPP_ASMase 23..323 CDD:277321 114/344 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343368
Domainoid 1 1.000 144 1.000 Domainoid score I4491
eggNOG 1 0.900 - - E1_KOG3770
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8708
Inparanoid 1 1.050 239 1.000 Inparanoid score I3276
OMA 1 1.010 - - QHG53732
OrthoDB 1 1.010 - - D1116351at2759
OrthoFinder 1 1.000 - - FOG0000551
OrthoInspector 1 1.000 - - otm46310
orthoMCL 1 0.900 - - OOG6_102108
Panther 1 1.100 - - LDO PTHR10340
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2142
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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