DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32052 and asm-2

DIOPT Version :9

Sequence 1:NP_001303410.1 Gene:CG32052 / 326184 FlyBaseID:FBgn0044328 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_509894.2 Gene:asm-2 / 181323 WormBaseID:WBGene00000212 Length:618 Species:Caenorhabditis elegans


Alignment Length:477 Identity:120/477 - (25%)
Similarity:196/477 - (41%) Gaps:104/477 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 HISDLHLDTLY-----------STQGDIYRSCWELARSVSGSNAN---SAASEPPGPFG-HYNCD 79
            |:||:|:|..|           |..|.....|.:.::...|:..|   .....|.||:| .|.||
 Worm   186 HLSDIHIDHQYVVGTEAYCQLDSALGTYAMCCRDYSQDSQGAPTNLKDKPIYVPAGPWGMPYLCD 250

  Fly    80 SPWRLIESAVKTMKAKQGDNVEFVLWTGDALSHSAQPLSEQKQHEILRNITELLGRSFSSQFIFP 144
            .|::..|||:|.: :|...::::::.|||..:|.:...:|....|.:.|:|.:....|....::.
 Worm   251 LPYQTFESAMKHI-SKTFKDLDYIIITGDFEAHDSWDYTEDLTRENMNNMTNVFLEYFPGVPVYV 314

  Fly   145 VLGHEDG-------------------SGSYRRLGELWRHWLPSEALVTFDQGGYYSIEQTKSRLR 190
            .:|:.:|                   ...|:.:.|:|.||:|.|||.|......|:: ..|..|:
 Worm   315 SIGNHEGVPQDAMAPHTMPEYDTRGPQWLYKIMSEMWSHWIPQEALDTVQYRASYAV-YPKPGLK 378

  Fly   191 IVALNT------NFMRLDPDPDPRASLSLRWPAEYFAEPKASVSSISAEDELLAEQQWLWLEEVL 249
            :::|||      ||.....:.||.|:|.                               ||.|.|
 Worm   379 LISLNTIYCSEFNFYLYVNEVDPDATLE-------------------------------WLIEEL 412

  Fly   250 TKSKEKQETVYIVGHMPPGVDERHLGTQHNQLTFTERNNQRYLDMVRRFAPVIQGQFFGHLHSDT 314
            ..|:.|.|.|:|:.|:|||.:....|...|           :.::|:|:...|...|:||.|.|.
 Worm   413 QDSENKGELVHIISHIPPGDNYCLKGWSWN-----------FFEIVKRYENTIAQMFYGHTHYDQ 466

  Fly   315 FRLIY---DAKGNPISWLMIAPSIVPRKAGIGSSNNPALRLYKFDTG----SGQVLDYTQFWLDL 372
            |.:.|   |....|..:..|:||:...     ...|||.|:|:.|.|    :..|.|...::.::
 Worm   467 FMVYYDMDDPNRRPFHFNWISPSLTTY-----DWLNPAYRIYEIDGGYEGATYTVKDAKTYFANV 526

  Fly   373 PLANRAN-EPTWQPEYNLTHYYALPEISAVALHNFAER-FTGTDLSWFTRYHRANAVRYHSGSAC 435
            ..||..| ||.|...|:...:|.:.:.|..:..:.::: :|.|.|  |..|.|. ..|.|..:.|
 Worm   527 TEANMKNKEPEWVLSYDTREHYQMADFSPQSWSDLSDKLWTNTTL--FRDYVRL-YYRNHYNNEC 588

  Fly   436 --PGLCMLNHYCAITR-LDYDE 454
              ...|.....|.|.: ..|||
 Worm   589 YTDYKCRYTFVCDIKKGRSYDE 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32052NP_001303410.1 MPP_ASMase 28..351 CDD:277321 90/363 (25%)
asm-2NP_509894.2 SapB 70..143 CDD:214797
SapB_1 72..106 CDD:282970
MPP_ASMase 184..501 CDD:277321 90/363 (25%)
CpdA 251..555 CDD:224327 86/352 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3770
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53732
OrthoDB 1 1.010 - - D369165at33208
OrthoFinder 1 1.000 - - FOG0000551
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R975
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.860

Return to query results.
Submit another query.