DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and LPXN

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001137467.1 Gene:LPXN / 9404 HGNCID:14061 Length:391 Species:Homo sapiens


Alignment Length:168 Identity:64/168 - (38%)
Similarity:100/168 - (59%) Gaps:3/168 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CHKCQEAITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCKK 71
            |..||:.|..::|.|||::||||||:|.||.|:|..:.|..:||...|...:.:.::..||.|..
Human   157 CASCQKPIAGKVIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSPRCAYCAA 221

  Fly    72 PILEKTICAMGESWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKPITDS 136
            |||:|.:.||.::||.:.|.| ..|.:....:.|:|:|.||||:||:..:|:.:|..|.:|:.::
Human   222 PILDKVLTAMNQTWHPEHFFC-SHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCGGCNRPVLEN 285

  Fly   137 AVLAMNVKWHRDCFRCNKCENPI-TSQTFTIDGDKPVC 173
            .:.||:..||.:||.|..|.... |...|.:|| :|.|
Human   286 YLSAMDTVWHPECFVCGDCFTSFSTGSFFELDG-RPFC 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829 17/49 (35%)
LIM 7..58 CDD:413332 23/50 (46%)
LIM 66..118 CDD:413332 22/51 (43%)
LPXNNP_001137467.1 LIM1_Leupaxin 155..209 CDD:188790 23/51 (45%)
LIM2_Leupaxin 216..267 CDD:188792 22/51 (43%)
LIM3_Leupaxin 275..327 CDD:188794 17/49 (35%)
LIM4_Paxillin_like 334..385 CDD:188725
Blue background indicates that the domain is not in the aligned region.

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