DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and PLIM2b

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_171683.1 Gene:PLIM2b / 839267 AraportID:AT1G01780 Length:205 Species:Arabidopsis thaliana


Alignment Length:154 Identity:36/154 - (23%)
Similarity:57/154 - (37%) Gaps:41/154 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CHKCQEAI-TKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERY-------- 62
            |:.|.:.: ...|::..|..:|...|.|.||...:..:.::...|...|...|.:.:        
plant    10 CNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKTHFEQLFKESGNFSK 74

  Fly    63 ------------TYT--------------CAGCKKPI--LEKTICAMGESWHEDCF-CCGGACKK 98
                        |.|              ||.|:|.:  ||| |...||.:|:.|| |..|.|  
plant    75 NFQPGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEK-IQMEGECFHKTCFRCAHGGC-- 136

  Fly    99 PLANQTFYERDGKPYCKKDYEDLF 122
            .|.:.::...|...||:..:..||
plant   137 TLTHSSYASLDSVLYCRHHFNQLF 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829
LIM 7..58 CDD:413332 11/51 (22%)
LIM 66..118 CDD:413332 20/54 (37%)
PLIM2bNP_171683.1 LIM1_SF3 6..68 CDD:188824 12/57 (21%)
LIM 104..164 CDD:413332 22/60 (37%)
Blue background indicates that the domain is not in the aligned region.

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