DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and pdlim7

DIOPT Version :9

Sequence 1:NP_001286122.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001025639.1 Gene:pdlim7 / 595027 XenbaseID:XB-GENE-5860425 Length:191 Species:Xenopus tropicalis


Alignment Length:46 Identity:9/46 - (19%)
Similarity:13/46 - (28%) Gaps:17/46 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VQSGEPVCNKCFVERYTYTCAGCKKPILEKTICAMGESWHEDCFCC 92
            :|:||....:....|||..                 ..||.:...|
 Frog   157 LQNGEKFITELQSPRYTRL-----------------RDWHHERSAC 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_001286122.1 LIM 7..58 CDD:295319 3/10 (30%)
LIM 66..118 CDD:295319 3/27 (11%)
LIM 126..176 CDD:259829
pdlim7NP_001025639.1 PDZ_signaling 3..81 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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