DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and PXN

DIOPT Version :9

Sequence 1:NP_001286122.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_016875215.1 Gene:PXN / 5829 HGNCID:9718 Length:1135 Species:Homo sapiens


Alignment Length:168 Identity:65/168 - (38%)
Similarity:99/168 - (58%) Gaps:1/168 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VCHKCQEAITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCK 70
            ||..|::.|..:::||:|||||||||:|.||.|:|....|..:.|:|.|.|.:...::..|..|.
Human   901 VCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYCN 965

  Fly    71 KPILEKTICAMGESWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKPITD 135
            .|||:|.:.|:..:||.:.|.| ..|......:.|:|:|||.||:|||.|:||.:|..|.:.|.:
Human   966 GPILDKVVTALDRTWHPEHFFC-AQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILE 1029

  Fly   136 SAVLAMNVKWHRDCFRCNKCENPITSQTFTIDGDKPVC 173
            :.:.|:|..||.:||.|.:|..|..:.:|.....:|.|
Human  1030 NYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYC 1067

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_001286122.1 LIM 7..58 CDD:295319 24/50 (48%)
LIM 66..118 CDD:295319 20/51 (39%)
LIM 126..176 CDD:259829 15/48 (31%)
PXNXP_016875215.1 Paxillin 60..259 CDD:281527
LIM1_Paxillin_like 902..954 CDD:259830 24/51 (47%)
LIM2_Paxillin 961..1012 CDD:188791 20/51 (39%)
LIM3_Paxillin_like 1020..1072 CDD:188724 15/48 (31%)
LIM4_Paxillin 1079..1130 CDD:188795
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149733
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1593918at2759
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.840

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