DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG31988 and fhl3b

DIOPT Version :9

Sequence 1:	NP_001286122.1	Gene:	CG31988 / 326182	FlyBaseID:	FBgn0051988	Length:	178	Species:	Drosophila melanogaster
Sequence 2:	NP_001093448.1	Gene:	fhl3b / 555053	ZFINID:	ZDB-GENE-030131-8356	Length:	290	Species:	Danio rerio

Alignment Length:	179	Identity:	58/179 - (32%)
Similarity:	85/179 - (47%)	Gaps:	15/179 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 CHKCQEAI--TKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGC 69
            ||:|:|.|  ..|.:....:.:|.:.|.|..|...:...:|..|....|||.|:...::..|..|
Zfish    40 CHECKELIEHNSRELYHEDRHYHEQCFRCSRCSRSLAKESFTCQEDALVCNNCYCNEFSSNCVAC 104

  Fly    70 KKPI------LEKTICAMGESWHEDCF-CCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCA 127
            .|.:      ||...|.    |||:|| |||  |::|:..|:|.....:.||...||..||.|||
Zfish   105 GKTVMPGSKRLEYEDCV----WHEECFVCCG--CEQPIGAQSFIPDKDEYYCVPCYEGRFAPRCA 163

  Fly   128 KCEKPITDSAVLAMNVKWHRDCFRCNKCENPITSQTFTIDGDKPVCPAC 176
            .|::.:....|...:..||::||.|..|:..:..|.||..|:.|.|..|
Zfish   164 HCKQTLVQGGVTYRDEPWHKECFLCTGCKVQLAGQPFTTQGEDPYCVKC 212

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG31988	NP_001286122.1	LIM	7..58	CDD:295319	15/52 (29%)
		LIM	66..118	CDD:295319	20/58 (34%)
		LIM	126..176	CDD:259829	16/49 (33%)
fhl3b	NP_001093448.1	LIM	<5..33	CDD:295319
		LIM1_FHL3	36..94	CDD:188807	16/53 (30%)
		LIM2_FHL3	98..155	CDD:188811	20/62 (32%)
		LIM3_FHL	162..213	CDD:188732	17/51 (33%)
		LIM4_FHL3	221..276	CDD:188818
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	54	1.000	Domainoid score	I11189
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	133	1.000	Inparanoid score	I4575
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000055
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X39
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	5	5.050