DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and fhl2b

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001006028.2 Gene:fhl2b / 450007 ZFINID:ZDB-GENE-041010-121 Length:279 Species:Danio rerio


Alignment Length:179 Identity:60/179 - (33%)
Similarity:93/179 - (51%) Gaps:5/179 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SIVCHKCQEAI--TKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTC 66
            |..|.:|::.|  ..|.::...:.||.:.|.|..|...::|..|:.:..:.:|.:|:...|:..|
Zfish    37 SNTCEECKKPIGCNSRDLSYKDRHWHDDCFHCFKCHRSLVDKPFSTKDEQLLCTECYSNEYSSKC 101

  Fly    67 AGCKKPIL--EKTICAMGESWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKC 129
            ..|||.|:  .:.:...|.||||.||.| ..|::|:..::|..:|...||...||..||.:|.:|
Zfish   102 FECKKTIMPGSRKMEHKGNSWHETCFTC-QRCQQPIGTKSFIPKDNSNYCVPCYEKQFALQCVQC 165

  Fly   130 EKPITDSAVLAMNVKWHRDCFRCNKCENPITSQTFTIDGDKPVCPACNC 178
            :||||...|...:..||:|||.|..|:..::.|.||...|.|.|..|.|
Zfish   166 KKPITTGGVTYHDQPWHKDCFLCTGCKQQLSGQRFTSRDDFPYCLNCFC 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829 20/49 (41%)
LIM 7..58 CDD:413332 12/52 (23%)
LIM 66..118 CDD:413332 19/53 (36%)
fhl2bNP_001006028.2 LIM <7..33 CDD:413332
LIM 36..97 CDD:413332 14/59 (24%)
LIM 101..157 CDD:413332 21/56 (38%)
LIM3_Fhl2 162..218 CDD:188815 22/53 (42%)
LIM4_FHL2 221..278 CDD:188817
Blue background indicates that the domain is not in the aligned region.

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