DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and fhl1

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001006703.1 Gene:fhl1 / 448334 XenbaseID:XB-GENE-964257 Length:296 Species:Xenopus tropicalis


Alignment Length:174 Identity:50/174 - (28%)
Similarity:78/174 - (44%) Gaps:5/174 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CHKCQE--AITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGC 69
            |.:|::  .:..:.:....:.||...|.|..|...:.:..|..:..:.:|.||.....:..|:||
 Frog    56 CAECRKPIGVDSKELHYKNRYWHDNCFRCAKCYHPLANEQFIAKDNKIMCAKCTTREDSLRCSGC 120

  Fly    70 KKPILE--KTICAMGESWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKP 132
            .|.|..  :.:...|.:|||:||.|.. ||:.:.:.:|:.:....||...:|..||..|.||..|
 Frog   121 HKQIQPGGRNVEYKGSAWHEECFTCSN-CKQAIGSGSFFPKGTDVYCVTCHEQKFAKNCVKCNNP 184

  Fly   133 ITDSAVLAMNVKWHRDCFRCNKCENPITSQTFTIDGDKPVCPAC 176
            ||...:...:..||.|||.|..|...:..|.||...|...|..|
 Frog   185 ITSGGITYQDQPWHGDCFVCETCHKKLAGQRFTAVEDHYYCVDC 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829 18/49 (37%)
LIM 7..58 CDD:413332 10/52 (19%)
LIM 66..118 CDD:413332 17/53 (32%)
fhl1NP_001006703.1 LIM1_FHL1 56..109 CDD:188730 10/52 (19%)
LIM2_FHL1 117..174 CDD:188808 18/57 (32%)
LIM3_FHL1 178..230 CDD:188813 19/51 (37%)
LIM4_FHL1 233..296 CDD:188734
Blue background indicates that the domain is not in the aligned region.

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