DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and fhl2a

DIOPT Version :9

Sequence 1:NP_001286122.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001003732.1 Gene:fhl2a / 445277 ZFINID:ZDB-GENE-040808-49 Length:279 Species:Danio rerio


Alignment Length:215 Identity:62/215 - (28%)
Similarity:94/215 - (43%) Gaps:38/215 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTESIVCHKCQEAI-----------------------------------TKRMITALGKTWHPEH 30
            |||...||.|:|::                                   ..|.::...:.||.:.
Zfish     1 MTERYDCHYCKESLFGKKYVLREDNPYCVKCYESLYSNTCEECKKPIGCNSRDLSYKDRHWHEDC 65

  Fly    31 FLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCKKPIL--EKTICAMGESWHEDCFCCG 93
            |.|..|...::|..|:.:..:.:|.:|:...|:..|..|||.|:  .:.:...|.||||.||.| 
Zfish    66 FHCFQCKRSLVDKPFSTKDEQLLCTECYSNEYSSKCHECKKTIMPGSRKMEHKGNSWHETCFTC- 129

  Fly    94 GACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKPITDSAVLAMNVKWHRDCFRCNKCENP 158
            ..|::|:..::|..:|...||...||..||.:|..|:||||...|...:..||:|||.|..|:..
Zfish   130 QRCQQPIGTKSFIPKDNHNYCVPCYEKQFAMQCVHCKKPITTGGVTYHDQPWHKDCFLCTGCKQQ 194

  Fly   159 ITSQTFTIDGDKPVCPACNC 178
            ::.|.||...|...|..|.|
Zfish   195 LSGQRFTSRDDFAYCLNCFC 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_001286122.1 LIM 7..58 CDD:295319 13/85 (15%)
LIM 66..118 CDD:295319 19/53 (36%)
LIM 126..176 CDD:259829 19/49 (39%)
fhl2aNP_001003732.1 LIM <7..33 CDD:295319 4/25 (16%)
LIM1_FHL2 36..97 CDD:188806 10/60 (17%)
LIM2_FHL2 101..157 CDD:188810 21/56 (38%)
LIM3_Fhl2 162..218 CDD:188815 21/53 (40%)
LIM 221..278 CDD:295319
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11189
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I4575
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104605
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.950

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