DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG31988 and Lims2

DIOPT Version :9

Sequence 1:	NP_001286122.1	Gene:	CG31988 / 326182	FlyBaseID:	FBgn0051988	Length:	178	Species:	Drosophila melanogaster
Sequence 2:	XP_006254658.1	Gene:	Lims2 / 361303	RGDID:	1305273	Length:	341	Species:	Rattus norvegicus

Alignment Length:	172	Identity:	53/172 - (30%)
Similarity:	84/172 - (48%)	Gaps:	3/172 - (1%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 VCHKCQEAITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCK 70
            :|.:|..||.::.:......:||:||.|.||.:::......:: ||..|..|..:.....|..|:
  Rat   139 ICQRCHLAIDEQPLMFKNDPYHPDHFSCSHCGKELTSDARELK-GELYCLPCHDKMGIPICGACR 202

  Fly    71 KPILEKTICAMGESWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKPITD 135
            :||..:.:.|:|:.||.:.|.| ..|:||......||:.|..||:..|..||...|..|...|..
  Rat   203 RPIEGRVVNALGKQWHVEHFVC-AKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEG 266

  Fly   136 SAVLAMNVKWHRDCFRCNKCENPITSQTFTIDGD-KPVCPAC 176
            ..|.|::..|..:||.|:.|...:|.:...::.| ||||..|
  Rat   267 DVVSALSKAWCVNCFSCSACNMKLTLKNKFVEFDMKPVCKRC 308

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG31988	NP_001286122.1	LIM	7..58	CDD:295319	14/50 (28%)
		LIM	66..118	CDD:295319	18/51 (35%)
		LIM	126..176	CDD:259829	16/50 (32%)
Lims2	XP_006254658.1	LIM1_PINCH	15..73	CDD:188717
		LIM2_PINCH	76..127	CDD:188718
		LIM3_PINCH	140..190	CDD:188719	14/50 (28%)
		LIM4_PINCH	196..249	CDD:188720	18/53 (34%)
		LIM5_PINCH	257..310	CDD:188721	17/52 (33%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1593918at2759
OrthoFinder	1	1.000	-	-		FOG0000055
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X39
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	4.010