DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and Synpo2l

DIOPT Version :9

Sequence 1:NP_001286122.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001292067.1 Gene:Synpo2l / 305675 RGDID:1565434 Length:978 Species:Rattus norvegicus


Alignment Length:21 Identity:6/21 - (28%)
Similarity:10/21 - (47%) Gaps:3/21 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 GGACKKPLANQTFYERDGKPY 113
            |||   |....:.:.|..:|:
  Rat   454 GGA---PSPAPSIFNRSARPF 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_001286122.1 LIM 7..58 CDD:295319
LIM 66..118 CDD:295319 6/21 (29%)
LIM 126..176 CDD:259829
Synpo2lNP_001292067.1 PDZ_signaling 6..85 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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