DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and SYNPO2

DIOPT Version :9

Sequence 1:NP_001286122.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_597734.2 Gene:SYNPO2 / 171024 HGNCID:17732 Length:1261 Species:Homo sapiens


Alignment Length:16 Identity:8/16 - (50%)
Similarity:11/16 - (68%) Gaps:0/16 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 LFAARCAKCEKPITDS 136
            |||.|.::.||.:.||
Human   875 LFAKRQSRMEKYVVDS 890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_001286122.1 LIM 7..58 CDD:295319
LIM 66..118 CDD:295319
LIM 126..176 CDD:259829 4/11 (36%)
SYNPO2NP_597734.2 Interaction with VPS18. /evidence=ECO:0000269|PubMed:23434281 1..180
PDZ_signaling 7..85 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..174
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..233
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 329..369
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:Q91YE8 398..406
Interaction with ACTN2. /evidence=ECO:0000269|PubMed:20554076 481..663
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 507..803
F-actin binding. /evidence=ECO:0000269|PubMed:23225103 534..663
Interaction with YWHAB. /evidence=ECO:0000250|UniProtKB:Q91YE8 607..811
Interaction with BAG3. /evidence=ECO:0000269|PubMed:23434281 615..626
PPPY motif. /evidence=ECO:0000305|PubMed:23434281 619..622
Interaction with ACTN2. /evidence=ECO:0000269|PubMed:20554076 664..924 8/16 (50%)
F-actin bundling activity. /evidence=ECO:0000269|PubMed:23225103 664..916 8/16 (50%)
F-actin binding. /evidence=ECO:0000269|PubMed:23225103 664..803
Actin binding. /evidence=ECO:0000250|UniProtKB:Q91YE8 751..900 8/16 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 834..870
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 937..956
Interaction with ZYX. /evidence=ECO:0000269|PubMed:16885336 1000..1019
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1041..1064
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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