DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and Fhl3

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_036019571.1 Gene:Fhl3 / 14201 MGIID:1341092 Length:297 Species:Mus musculus


Alignment Length:174 Identity:59/174 - (33%)
Similarity:90/174 - (51%) Gaps:5/174 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CHKCQEAI--TKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGC 69
            |.:||:.|  ..|.:....:.:|...|.|..|...:.|..|..|..|.:||:|:...::..|:.|
Mouse    48 CAECQQLIGHDSRELFYEDRHFHEGCFRCCRCQRSLADEPFTCQDSELLCNECYCTAFSSQCSAC 112

  Fly    70 KKPIL--EKTICAMGESWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKP 132
            .:.::  .:.:...|::|||.||.|.| |::||.:::|....|..||...||:.||.|||:|.|.
Mouse   113 GETVMPGSRKLEYGGQTWHEHCFLCSG-CEQPLGSRSFVPDKGAHYCVPCYENKFAPRCARCSKT 176

  Fly   133 ITDSAVLAMNVKWHRDCFRCNKCENPITSQTFTIDGDKPVCPAC 176
            :|...|...:..|||:|..|..|:.|:..|.||...|.|.|.||
Mouse   177 LTQGGVTYRDQPWHRECLVCTGCKTPLAGQQFTSRDDDPYCVAC 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829 19/49 (39%)
LIM 7..58 CDD:413332 15/52 (29%)
LIM 66..118 CDD:413332 17/53 (32%)
Fhl3XP_036019571.1 LIM <13..41 CDD:413332
LIM1_FHL3 44..102 CDD:188807 16/53 (30%)
LIM2_FHL3 106..163 CDD:188811 17/57 (30%)
LIM3_FHL 170..221 CDD:188732 21/51 (41%)
LIM 229..293 CDD:413332
Blue background indicates that the domain is not in the aligned region.

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