DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and Fhl2

DIOPT Version :9

Sequence 1:NP_001286122.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001276462.1 Gene:Fhl2 / 14200 MGIID:1338762 Length:279 Species:Mus musculus


Alignment Length:215 Identity:62/215 - (28%)
Similarity:95/215 - (44%) Gaps:38/215 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTESIVCHKCQEAI-TKRMI------------------------TALG----------KTWHPEH 30
            |||...||.|.|:: .|:.|                        |.:|          :.||...
Mouse     1 MTERFDCHHCNESLYGKKYILKEENPHCVACFEELYANTCEECGTPIGCDCKDLSYKDRHWHEGC 65

  Fly    31 FLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCKKPILEKT--ICAMGESWHEDCFCCG 93
            |.|..|...::|..|..:..:.:|..|:...|:..|..|||.|:..|  :...|.||||.||.| 
Mouse    66 FHCSRCGSSLVDKPFAAKEEQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGSSWHETCFTC- 129

  Fly    94 GACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKPITDSAVLAMNVKWHRDCFRCNKCENP 158
            ..|::|:..::|..::.:.:|...||..:|.:|.:|:||||...|......||::||.|..|:..
Mouse   130 QRCQQPIGTKSFIPKENQNFCVPCYEKQYALQCVQCKKPITTGGVTYREQPWHKECFVCTACKKQ 194

  Fly   159 ITSQTFTIDGDKPVCPACNC 178
            ::.|.||...:.|.|..|.|
Mouse   195 LSGQRFTARDEFPYCLTCFC 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_001286122.1 LIM 7..58 CDD:295319 16/85 (19%)
LIM 66..118 CDD:295319 18/53 (34%)
LIM 126..176 CDD:259829 18/49 (37%)
Fhl2NP_001276462.1 LIM <5..33 CDD:413332 6/27 (22%)
LIM 36..97 CDD:413332 11/60 (18%)
LIM 101..157 CDD:413332 20/56 (36%)
LIM 162..218 CDD:413332 20/53 (38%)
LIM4_FHL2 221..278 CDD:188817
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I4604
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104605
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.950

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