DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31988 and LOC1270178

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_061519741.1 Gene:LOC1270178 / 1270178 VectorBaseID:AGAMI1_015018 Length:2106 Species:Anopheles gambiae


Alignment Length:172 Identity:61/172 - (35%)
Similarity:89/172 - (51%) Gaps:5/172 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VCHKCQEAITKRMITALGKTWHPEHFLCH--HCDEQILDATFNVQSGEPVCNKCFVERYTYTCAG 68
            :|..||:.|....|||||:.|.|:||:||  :|...:.|..|..:.|:..|..||.|.....|:.
Mosquito  1931 LCGCCQQQIRGPFITALGRIWCPDHFICHNANCKRPLADIGFVEEKGDLYCEYCFEEFLAPLCSK 1995

  Fly    69 CKKPILEKTICAMGESWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKPI 133
            |...:....:.|:|:.:|.:||.| ..|.|...|..|:..:|.|||:||:.|||..:|..|..|:
Mosquito  1996 CNGRVKGDCLNAIGKQFHPECFKC-TYCGKQFGNSPFFLEEGDPYCEKDWNDLFTTKCFACGFPV 2059

  Fly   134 T--DSAVLAMNVKWHRDCFRCNKCENPITSQTFTIDGDKPVC 173
            .  |..|.|:|..:|..||.|..|:..:..|:|...|.:|.|
Mosquito  2060 EAGDKWVEALNNNYHSQCFNCTSCKKNLEGQSFFAKGGRPFC 2101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829 17/50 (34%)
LIM 7..58 CDD:413332 20/52 (38%)
LIM 66..118 CDD:413332 17/51 (33%)
LOC1270178XP_061519741.1 None

Return to query results.
Submit another query.