DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and pxn

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_031752049.1 Gene:pxn / 100216044 XenbaseID:XB-GENE-941407 Length:1070 Species:Xenopus tropicalis


Alignment Length:168 Identity:66/168 - (39%)
Similarity:98/168 - (58%) Gaps:1/168 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VCHKCQEAITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCK 70
            ||..|::.|..:::||:|||||||||:|.||.|:|....|..:.|:|.|.|.:...::..|..|.
 Frog   836 VCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCFYCN 900

  Fly    71 KPILEKTICAMGESWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKPITD 135
            .|||:|.:.|:..:||.:.|.| ..|......:.|:|||||.||:|||.|:||.:|..|...|.:
 Frog   901 GPILDKVVTALDRTWHPEHFFC-AQCGAFFGPEGFHERDGKAYCRKDYFDMFAPKCGGCTHAILE 964

  Fly   136 SAVLAMNVKWHRDCFRCNKCENPITSQTFTIDGDKPVC 173
            :.:.|:|..||.:||.|.:|..|..:.:|.....:|.|
 Frog   965 NYISALNTLWHPECFVCRECFTPFINGSFFEHDGQPYC 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829 15/48 (31%)
LIM 7..58 CDD:413332 24/50 (48%)
LIM 66..118 CDD:413332 21/51 (41%)
pxnXP_031752049.1 Paxillin 45..234 CDD:460962
LIM1_Paxillin_like 837..889 CDD:259830 24/51 (47%)
LIM2_Paxillin 896..947 CDD:188791 21/51 (41%)
LIM3_Paxillin_like 955..1007 CDD:188724 15/48 (31%)
LIM4_Paxillin 1014..1065 CDD:188795
Blue background indicates that the domain is not in the aligned region.

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