DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and tgfb1i1

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_012825390.2 Gene:tgfb1i1 / 100038241 XenbaseID:XB-GENE-493249 Length:503 Species:Xenopus tropicalis


Alignment Length:168 Identity:67/168 - (39%)
Similarity:95/168 - (56%) Gaps:1/168 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VCHKCQEAITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCK 70
            :|..||..|..:::||||.|||||||:|.||...|....|..:.|.|.|.|.:...|...||.|:
 Frog   269 LCESCQRPIAGQVVTALGHTWHPEHFVCAHCHALIGTTNFFEKDGRPYCEKDYFMLYAPRCALCE 333

  Fly    71 KPILEKTICAMGESWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKPITD 135
            .||::..:.|:|.:||.:.||| ..||||:..:.|:|:||:.||..||..||.|.||.|.:.:.:
 Frog   334 LPIVQNMVTALGCTWHPEHFCC-KVCKKPIGEEGFHEKDGEQYCSDDYFRLFGAVCAGCSEAVKE 397

  Fly   136 SAVLAMNVKWHRDCFRCNKCENPITSQTFTIDGDKPVC 173
            |.:.|:...||..||.|:.|..|..:.:|......|:|
 Frog   398 SYISALGGLWHPQCFVCHVCHTPFINGSFFEHEGLPLC 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829 15/48 (31%)
LIM 7..58 CDD:413332 24/50 (48%)
LIM 66..118 CDD:413332 22/51 (43%)
tgfb1i1XP_012825390.2 Paxillin <61..>117 CDD:460962
LIM1_Paxillin_like 270..322 CDD:259830 24/51 (47%)
LIM2_Paxillin_like 329..380 CDD:188723 22/51 (43%)
LIM3_Paxillin_like 388..440 CDD:188724 15/48 (31%)
LIM4_Paxillin_like 447..498 CDD:188725
Blue background indicates that the domain is not in the aligned region.

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