DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31952 and lea-1

DIOPT Version :9

Sequence 1:NP_001285585.1 Gene:CG31952 / 326179 FlyBaseID:FBgn0051952 Length:181 Species:Drosophila melanogaster
Sequence 2:NP_001256160.1 Gene:lea-1 / 3564838 WormBaseID:WBGene00002263 Length:1397 Species:Caenorhabditis elegans


Alignment Length:173 Identity:57/173 - (32%)
Similarity:86/173 - (49%) Gaps:12/173 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DEGKKKAAEAAAAAKEAAASAAQAAKTKAAGAAGSAKEAAGAAASAAKDKAGAAAASAKEKAAGA 66
            |..:.||::|..:||:.|:.|....|.|    ||.||:.||.|....|||||.|..|.|:||:.|
 Worm   680 DNVENKASDAYNSAKDKASDAWDKTKDK----AGEAKDKAGDAWDNTKDKAGNAWDSTKDKASDA 740

  Fly    67 AVAVQQSASSAAIAAREKAANAAEFTKEKATAAAAAATEAATSAASTVREKAAAAAVAVRAKASA 131
            ....:..||.    |:|.|.:||:..|:|:.:......:..:.|..:|:|||:..|.:.:|.:|.
 Worm   741 WDTTKDKASD----AKESAGDAADSAKDKSKSITETIGDKISGAYDSVKEKASDVADSFKAHSSD 801

  Fly   132 TAIAVRDSVTAVAVAAQGAAAAAKDKVATAAASAAAAAKSKVT 174
            ....|..|.:....:|:..|:.|.|    ||..|..:.|.|.|
 Worm   802 AQDTVESSASDTLESAKHHASDAAD----AAQDAFDSVKEKTT 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31952NP_001285585.1 None
lea-1NP_001256160.1 Apolipoprotein 214..371 CDD:279749
Apolipoprotein 588..753 CDD:279749 31/80 (39%)
DUF883 885..>954 CDD:295076
Apolipoprotein 945..1113 CDD:279749
DUF883 994..>1060 CDD:295076
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR47372
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.100

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