DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31937 and RDH8

DIOPT Version :10

Sequence 1:NP_608616.2 Gene:CG31937 / 326177 FlyBaseID:FBgn0031360 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_056540.3 Gene:RDH8 / 50700 HGNCID:14423 Length:311 Species:Homo sapiens


Alignment Length:197 Identity:60/197 - (30%)
Similarity:97/197 - (49%) Gaps:15/197 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 QVVWITGASSGIGRALALSLARHGVK---LVLSARRLEQLEQVQEECLAAARGLLATKDVLVIQM 108
            :.|.|:|.|||||..||:.||....|   :|.:.|.|.     ::|.|.||.|....:.:.|.|:
Human     6 RTVLISGCSSGIGLELAVQLAHDPKKRYQVVATMRDLG-----KKETLEAAAGEALGQTLTVAQL 65

  Fly   109 DMLDLDEHKTHLNTVLNHFHRLDVLVNNAGRSQRASWTEVEIEVDRELFELDVFAVVHLSRLVVR 173
            |:...:.....|:.:..   .:||||||||.........:.:...:.:|:.:.|..|.|.:.|:.
Human    66 DVCSDESVAQCLSCIQG---EVDVLVNNAGMGLVGPLEGLSLAAMQNVFDTNFFGAVRLVKAVLP 127

  Fly   174 YFVEQNGGRGHIAATSSIAGFSPVPFSPTYCAAKHALNAYLLSLKVEMRKLD--VSLFAPGPIAT 236
            ....:.  :|||...||:.|...|.|:..|.|:|.||..:..||.:::.:.:  :||..|||:.|
Human   128 GMKRRR--QGHIVVISSVMGLQGVIFNDVYAASKFALEGFFESLAIQLLQFNIFISLVEPGPVVT 190

  Fly   237 DF 238
            :|
Human   191 EF 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31937NP_608616.2 Rossmann-fold NAD(P)(+)-binding proteins 44..293 CDD:473865 60/197 (30%)
RDH8NP_056540.3 type1_17beta-HSD-like_SDR_c 6..262 CDD:187666 60/197 (30%)

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