DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31937 and rdhB

DIOPT Version :9

Sequence 1:NP_608616.2 Gene:CG31937 / 326177 FlyBaseID:FBgn0031360 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001262831.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster


Alignment Length:203 Identity:61/203 - (30%)
Similarity:100/203 - (49%) Gaps:16/203 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 RGQVVWITGASSGIGRALALSLARHGVKLVLSARRLEQLEQVQEECLAAARGLLATKDVLVIQMD 109
            |.:|..:||||.|||...|:.||..|:.:|..|||:|.:|.::::.....:       :...|.|
  Fly     8 RNKVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIEALRDQVTGVGK-------IFARQCD 65

  Fly   110 MLDLDEHKTHLNTVLNHFHRLDVLVNNAGRSQRASWTEVEIEVDRELFELDVFAVVHLSRLVVRY 174
            :.|.::..:..|.:...|..:.||:.|||..:....:|...:..:|||:.:|.|.....|..:::
  Fly    66 LNDEEQLASAFNWIREKFQAIHVLICNAGILKANFLSESPTKDIKELFDTNVVATASCLREALKH 130

  Fly   175 FVEQNGGRGHIAATSSIAGFS----PVPFSPTYCAAKHALNAYLLSLKVEMR--KLDVSL--FAP 231
            ..... .||||...:|:.|..    |||....|.|.|||:.|...:::.|:.  ||::.|  ..|
  Fly   131 MAAVK-VRGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLTSICP 194

  Fly   232 GPIATDFL 239
            |.:.||||
  Fly   195 GMVDTDFL 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31937NP_608616.2 NADB_Rossmann 44..293 CDD:304358 61/203 (30%)
adh_short 47..245 CDD:278532 60/201 (30%)
rdhBNP_001262831.1 Mgc4172-like_SDR_c 4..244 CDD:187601 61/203 (30%)
YdfG 9..241 CDD:226674 60/202 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1205
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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