DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31937 and Ldsdh1

DIOPT Version :9

Sequence 1:NP_608616.2 Gene:CG31937 / 326177 FlyBaseID:FBgn0031360 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster


Alignment Length:318 Identity:78/318 - (24%)
Similarity:127/318 - (39%) Gaps:79/318 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLLLLVLYYVVYVLLWI-LLDCNVALWYKSRFGVSLSSMRGQVVWITGASSGIGRALALSLARHG 70
            ::||:|...::.|..|: :.:..|.|:.    ...|..:.|:||.|||...|:|:.:||..|:.|
  Fly    22 IVLLVVDIVMLIVKFWLAIAEAIVGLFR----APPLDDVNGKVVLITGTGHGMGKEMALQYAKLG 82

  Fly    71 VKLVLSARRLEQLEQVQEECL-------AAARGLL--ATKDVLVIQMDMLDLDEHKTHLNTVLNH 126
            ..::.    .:..||...:.:       ..|.|.:  .||...:|::......||        ..
  Fly    83 ATILC----WDVNEQTNNQTVKEIKNNGGKAFGYVCNVTKREELIELAQKVRKEH--------GF 135

  Fly   127 FHRLDVLVNNAG---RSQRASWTEVEIEVDRELFELDVFAVVHLSRLVVRYFVEQNGGRGHIAAT 188
            .|   |:|||||   .......||.||   |.::|::|.:...:.:..:...:|:|  .|.|.|.
  Fly   136 IH---VVVNNAGIMPCHPLLEHTENEI---RLMYEINVLSHFWIIQAFLPDMIERN--EGSIVAL 192

  Fly   189 SSIAG-FSPVPFSPTYCAAKHALNAYLLSLKVEMRK----------------LDVSL-------- 228
            ||.|| |..:...| ||..|.|:..|:.:|..|:|:                :|..|        
  Fly   193 SSCAGLFGLINLVP-YCGTKFAVRGYMAALVEELRQKNPQNNVKLTTIYPYMIDTGLCKNPRYRF 256

  Fly   229 -----FAPGPIATDFLQEAFTGSQGGKVGLSTANQKR--MTAQRCGDLF---AVALAN 276
                 ..|..:|...:.||      .:.||..|...|  :.|::.|.|.   |:.|.|
  Fly   257 PNLFKLIPADVAAGSIIEA------QRQGLEEAAIPRHFVAAEKIGRLIPRKAMRLVN 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31937NP_608616.2 NADB_Rossmann 44..293 CDD:304358 70/280 (25%)
adh_short 47..245 CDD:278532 59/239 (25%)
Ldsdh1NP_572436.1 adh_short 59..248 CDD:278532 54/209 (26%)
NADB_Rossmann 60..287 CDD:304358 62/253 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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