DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31937 and rdh8a

DIOPT Version :9

Sequence 1:NP_608616.2 Gene:CG31937 / 326177 FlyBaseID:FBgn0031360 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_957001.1 Gene:rdh8a / 280648 ZFINID:ZDB-GENE-021115-3 Length:318 Species:Danio rerio


Alignment Length:204 Identity:61/204 - (29%)
Similarity:109/204 - (53%) Gaps:15/204 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LSSMRGQ-VVWITGASSGIGRALALSLARHGVK---LVLSARRLEQLEQVQEECLAAARGLLATK 101
            ::|..|| ||.|||.|||||..:|:.|||...|   ::.:.|.|::.:::.|     |.|.:..:
Zfish     1 MASGGGQKVVLITGCSSGIGLRIAVLLARDEQKRYHVIATMRDLKKKDRLVE-----AAGEVYGQ 60

  Fly   102 DVLVIQMDMLDLDEHKTHLNTVLNHFHRLDVLVNNAGRSQRASWTEVEIEVDRELFELDVFAVVH 166
            .:.::.:|:...:..:..:|:|.:  ..:|||:||||.........:.::..:.:||.:.|..|.
Zfish    61 TLTLLPLDICSDESVRQCVNSVKD--RHIDVLINNAGVGLLGPVESISMDEMKRVFETNFFGTVR 123

  Fly   167 LSRLVVRYFVEQNGGRGHIAATSSIAGFSPVPFSPTYCAAKHALNAYLLSLKVEMRKLDV--SLF 229
            :.:.|:....::..  |||...||:.|...|.|:..|.|:|.|:..:..|:.|::.|.:|  ||.
Zfish   124 MIKEVMPDMKKRQA--GHIIIMSSVMGLQGVVFNDVYTASKFAIEGFCESMAVQLLKFNVKLSLI 186

  Fly   230 APGPIATDF 238
            .|||:.|:|
Zfish   187 EPGPVHTEF 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31937NP_608616.2 NADB_Rossmann 44..293 CDD:304358 60/201 (30%)
adh_short 47..245 CDD:278532 59/198 (30%)
rdh8aNP_957001.1 type1_17beta-HSD-like_SDR_c 8..265 CDD:187666 58/197 (29%)
adh_short 8..207 CDD:278532 58/197 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1205
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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