DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31928 and Pga3

DIOPT Version :10

Sequence 1:NP_722705.1 Gene:CG31928 / 326175 FlyBaseID:FBgn0051928 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_068521.1 Gene:Pga3 / 60372 RGDID:621573 Length:387 Species:Rattus norvegicus


Alignment Length:341 Identity:117/341 - (34%)
Similarity:176/341 - (51%) Gaps:19/341 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 TVSKENLINSHNTEYYVTAGFGTPKSQPVTLLVDTASANLLVYSSEFVKQSCLHHDGYNSSESQT 142
            :|:.|.:.|..:..|..|...||| .|...:::||.|::|.|.|......:|.||..:|..:|.|
  Rat    60 SVTYEPMRNYLDLVYIGTISIGTP-PQEFKVVLDTGSSDLWVPSIYCSSPACAHHKVFNPLQSST 123

  Fly   143 YQANGSPFQIQFASQEILTGILSTDTFTLGDLVIKNQTFAEINSAPTDMCKRSNFDGIIGLGFSE 207
            :..:|.|..:.:.|.| ::|.|:.||..:|||.:..|.|......|....:.:.||||:|||:..
  Rat   124 FLVSGRPVNVAYGSGE-MSGFLAYDTVKIGDLTVVAQAFGLSLEEPGRFMEHAVFDGILGLGYPN 187

  Fly   208 IALNGVETPLDNILEQGLIDEPIFSLYVNRNASDASNGGVLLLGGSDPTLYSGCLTYVPVSKVGF 272
            :.|.||....||:..||||.:.:|:.|:   :|....|.||:|||.||:.|.|.|.:|||||..:
  Rat   188 LGLQGVTPVFDNLWIQGLIPQNLFAFYL---SSKDEKGSVLMLGGVDPSYYHGELHWVPVSKPSY 249

  Fly   273 WQITVGQVEIGSKKLC--SNCQAIFDMGTSLIIVPCPALKIINKKLGIKETDRKDGVYIIDCKKV 335
            ||:.|..:.:..:.:.  ..||.|.|.||||:..|..::..|...:|.|.:.  ||.|.:.|..:
  Rat   250 WQLAVDSISMNGEIIACDGGCQGIMDTGTSLVTGPRSSILNIQNLIGAKASG--DGEYFLKCDTI 312

  Fly   336 SHLPKIVFNIGWKDFTLNPSDYI-LNYSGTCVSGFSSLSDCNGTQTNDDSEDLNNIWVFGDVFFG 399
            :.||.|||.|....:.:..|.|| .::|..|.|.|.        ::.||..| ..:||.||||..
  Rat   313 NTLPDIVFTIDSVTYPVPASAYIRKDHSHNCRSNFE--------ESTDDPSD-PELWVLGDVFLR 368

  Fly   400 AIFTLFDFGLKLVGMA 415
            ..||:||.....:|:|
  Rat   369 LYFTVFDRANNRIGLA 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31928NP_722705.1 Asp 91..416 CDD:394983 114/328 (35%)
Pga3NP_068521.1 A1_Propeptide 18..44 CDD:462326
pepsin_retropepsin_like 64..385 CDD:472175 116/337 (34%)
Blue background indicates that the domain is not in the aligned region.

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